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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475541   probable ribose-5-phosphate isomerase 2 
 ppo-r.4   7475541   probable ribose-5-phosphate isomerase 2 
 ppo-m.4   7475541   probable ribose-5-phosphate isomerase 2 
 ppo-u.5   7482872   probable ribose-5-phosphate isomerase 2 
 ppo-u.5   7472990   probable ribose-5-phosphate isomerase 2 
 gma-u.5   100795150   probable ribose-5-phosphate isomerase 2 
 gma-u.5   100790894   probable ribose-5-phosphate isomerase 2 
 mtr-u.5   11409058   probable ribose-5-phosphate isomerase 1 
 ath-u.5   RPI2   ribose-5-phosphate isomerase 2 
 ath-u.5   RSW10   Ribose 5-phosphate isomerase, type A protein 
 vvi-u.5   100247460   probable ribose-5-phosphate isomerase 2 
 vvi-u.5   100257096   probable ribose-5-phosphate isomerase 2 
 sly-u.5   101260137   probable ribose-5-phosphate isomerase 2 

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Top 50 coexpressed genes to 7475541 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475541 (ppo-u.5 coexpression data)

CoexMap"7475541"


ppoLOC7475541 | Entrez gene ID : 7475541    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 5 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00030 [list] [network] Pentose phosphate pathway (71 genes)
pop00710 [list] [network] Carbon fixation by Calvin cycle (101 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0009052 [list] [network] pentose-phosphate shunt, non-oxidative branch  (10 genes)  IEA  
GO CC
GO MF
GO:0004751 [list] [network] ribose-5-phosphate isomerase activity  (8 genes)  IEA  
Protein XP_002314818.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 4  (predict for XP_002314818.3)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_002314818.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475541

.
ppo-r.4
for
7475541

.
ppo-m.4
for
7475541

.
ppo-u.5
for
7482872

.
ppo-u.5
for
7472990

.
gma-u.5
for
100795150

.
gma-u.5
for
100790894

.
mtr-u.5
for
11409058

.
ath-u.5
for
RPI2

.
ath-u.5
for
RSW10

.
vvi-u.5
for
100247460

.
vvi-u.5
for
100257096

.
sly-u.5
for
101260137

.


Ortholog ID: 6476
Species ath ath gma gma sly bra bra vvi vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol RPI2 RSW10 LOC100795150 LOC100790894 LOC101260137 LOC103827594 LOC103852702 LOC100257096 LOC100247460 LOC7475541 LOC7472990 LOC11409058 LOC107916555 LOC107946276 LOC125587003 LOC106381915 LOC102603019 LOC102581814 LOC102627714 LOC107786848 LOC107821545
Function* ribose-5-phosphate isomerase 2 Ribose 5-phosphate isomerase, type A protein probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 1 probable ribose-5-phosphate isomerase 2 probable ribose-5-phosphate isomerase 2 putative ribose-5-phosphate isomerase 2 putative ribose-5-phosphate isomerase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath01230 Biosynthesis of amino acids 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly00592 alpha-Linolenic acid metabolism 3
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi03082 ATP-dependent chromatin remodeling 3
vvi00030 Pentose phosphate pathway 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00030 Pentose phosphate pathway 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814657 843450 100795150 100790894 101260137 103827594 103852702 100257096 100247460 7475541 7472990 11409058 107916555 107946276 125587003 106381915 102603019 102581814 102627714 107786848 107821545
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