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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475652   uncharacterized LOC7475652 
 ppo-r.4   7475652   uncharacterized LOC7475652 
 ppo-m.4   7475652   uncharacterized LOC7475652 
 ppo-u.5   7486755   uncharacterized LOC7486755 
 gma-u.5   100807785   uncharacterized LOC100807785 
 gma-u.5   100788837   uncharacterized LOC100788837 
 gma-u.5   100819907   uncharacterized LOC100819907 
 mtr-u.5   11411170   uncharacterized LOC11411170 
 mtr-u.5   11426047   uncharacterized LOC11426047 
 ath-u.5   AT1G17970   RING/U-box superfamily protein 
 ath-u.5   AT1G73760   RING/U-box superfamily protein 
 vvi-u.5   100252628   uncharacterized LOC100252628 
 sly-u.5   101251666   uncharacterized LOC101251666 
 sly-u.5   101244847   ring finger domain-containing protein 
 osa-u.5   4339524   uncharacterized LOC4339524 
 osa-u.5   9269271   uncharacterized LOC9269271 
 zma-u.5   100285775   protein binding protein 
 zma-u.5   103630690   E3 ubiquitin-protein ligase Arkadia 
 zma-u.5   100281993   uncharacterized LOC100281993 

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Top 50 coexpressed genes to 7475652 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475652 (ppo-u.5 coexpression data)

CoexMap"7475652"


ppoLOC7475652 | Entrez gene ID : 7475652    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
Protein XP_002321493.3 [sequence] [blastp]
XP_024442781.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  pero 1  (predict for XP_002321493.3)
nucl 7,  cyto 3  (predict for XP_024442781.2)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_002321493.3)
chlo 5,  other 5  (predict for XP_024442781.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475652

.
ppo-r.4
for
7475652

.
ppo-m.4
for
7475652

.
ppo-u.5
for
7486755

.
gma-u.5
for
100807785

.
gma-u.5
for
100788837

.
gma-u.5
for
100819907

.
mtr-u.5
for
11411170

.
mtr-u.5
for
11426047

.
ath-u.5
for
AT1G17970

.
ath-u.5
for
AT1G73760

.
vvi-u.5
for
100252628

.
sly-u.5
for
101251666

.
sly-u.5
for
101244847

.
osa-u.5
for
4339524

.
osa-u.5
for
9269271

.
zma-u.5
for
100285775

.
zma-u.5
for
103630690

.
zma-u.5
for
100281993

.


Ortholog ID: 3162
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol AT1G73760 AT1G17970 LOC100818517 LOC100788837 LOC101251666 LOC101244847 LOC9269271 LOC4339524 LOC100285775 LOC103630690 LOC103835929 LOC103831852 LOC100245764 LOC7486755 LOC7475652 LOC11411170 LOC11426047 LOC123078922 LOC123070510 LOC123449190 LOC123444164 LOC107891981 LOC107888783 LOC111207187 LOC106382952 LOC8074552 LOC8063097 LOC102601442 LOC102630351 LOC100824389 LOC100839508 LOC107826725 LOC107825792
Function* RING/U-box superfamily protein RING/U-box superfamily protein uncharacterized LOC100818517 uncharacterized LOC100788837 uncharacterized LOC101251666 ring finger domain-containing protein uncharacterized LOC9269271 uncharacterized LOC4339524 protein binding protein E3 ubiquitin-protein ligase Arkadia uncharacterized LOC103835929 E3 ubiquitin-protein ligase MBR1 uncharacterized LOC100245764 uncharacterized LOC7486755 uncharacterized LOC7475652 uncharacterized LOC11411170 uncharacterized LOC11426047 E3 ubiquitin-protein ligase MBR2 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 uncharacterized LOC123449190 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC111207187 E3 ubiquitin-protein ligase MBR2 uncharacterized LOC8074552 uncharacterized LOC8063097 uncharacterized LOC102601442 uncharacterized LOC102630351 uncharacterized LOC100824389 uncharacterized LOC100839508 uncharacterized LOC107826725 uncharacterized LOC107825792
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 5
ghi00592 alpha-Linolenic acid metabolism 5
ghi01212 Fatty acid metabolism 5
ghi00410 beta-Alanine metabolism 4
ghi00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00410 beta-Alanine metabolism 8
ghi00640 Propanoate metabolism 8
ghi00071 Fatty acid degradation 7
ghi01212 Fatty acid metabolism 7
ghi01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
sbi00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04712 Circadian rhythm - plant 2
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843711 838377 100818517 100788837 101251666 101244847 9269271 4339524 100285775 103630690 103835929 103831852 100245764 7486755 7475652 11411170 11426047 123078922 123070510 123449190 123444164 107891981 107888783 111207187 106382952 8074552 8063097 102601442 102630351 100824389 100839508 107826725 107825792
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