Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475657   heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 
 ppo-r.4   7475657   heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 
 ppo-m.4   7475657   heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 
 gma-u.5   GPPS   geranyl-diphosphate synthase 
 mtr-u.5   11423374   heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 
 vvi-u.5   100257234   heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 

close


Top 50 coexpressed genes to 7475657 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7475657 (ppo-u.5 coexpression data)

CoexMap"7475657"


ppoLOC7475657 | Entrez gene ID : 7475657    
Species ppo gma mtr vvi hvu osa sot tae nta bra cit ghi zma bna bdi sly ath sbi cre
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00900 [list] [network] Terpenoid backbone biosynthesis (75 genes)
GO BP
GO:0008299 [list] [network] isoprenoid biosynthetic process  (136 genes)  IEA  
GO CC
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (38 genes)  IEA  
Protein XP_024442001.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_024442001.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_024442001.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475657

.
ppo-r.4
for
7475657

.
ppo-m.4
for
7475657

.
gma-u.5
for
GPPS

.
mtr-u.5
for
11423374

.
vvi-u.5
for
100257234

.


Ortholog ID: 14234
Species gma vvi ppo mtr ghi ghi sot cit cit nta nta
Symbol GPPS LOC100257234 LOC7475657 LOC11423374 LOC107932731 LOC107943234 LOC107060335 LOC102627355 LOC127900357 LOC107779444 LOC107788443
Function* geranyl-diphosphate synthase heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like heterodimeric geranylgeranyl pyrophosphate synthase small subunit 2, chloroplastic-like heterodimeric geranylgeranyl pyrophosphate synthase small subunit 2, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00591 Linoleic acid metabolism 3
ghi00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00591 Linoleic acid metabolism 3
ghi00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
sot02010 ABC transporters 2
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta00591 Linoleic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100170743 100257234 7475657 11423374 107932731 107943234 107060335 102627355 127900357 107779444 107788443
The preparation time of this page was 0.1 [sec].