Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7475711   zinc finger CCCH domain-containing protein 39 
 ppo-u.5   7472142   zinc finger CCCH domain-containing protein 39 
 ppo-u.5   7477872   zinc finger CCCH domain-containing protein 39 
 ppo-u.5   7491864   zinc finger CCCH domain-containing protein 12 
 gma-u.5   100788208   zinc finger CCCH domain-containing protein 12 
 gma-u.5   100780649   zinc finger CCCH domain-containing protein 39 
 ath-u.5   AT2G35430   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-u.5   AT3G19360   Zinc finger (CCCH-type) family protein 
 ath-u.5   AT1G32360   Zinc finger (CCCH-type) family protein 
 vvi-u.5   100247398   zinc finger CCCH domain-containing protein 39 
 vvi-u.5   100262704   zinc finger CCCH domain-containing protein 12 
 vvi-u.5   104880257   zinc finger CCCH domain-containing protein 39 
 sly-u.5   101249238   zinc finger CCCH domain-containing protein 39-like 
 sly-u.5   101263122   zinc finger CCCH domain-containing protein 56 
 osa-u.5   4344715   zinc finger CCCH domain-containing protein 56 
 zma-u.5   100193200   uncharacterized LOC100193200 

close


Top 50 coexpressed genes to 7475711 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7475711 (ppo-m.4 coexpression data)

CoexMap"7475711"


ppoLOC7475711 | Entrez gene ID : 7475711    
Species ppo gma ath vvi sly osa zma hvu mtr sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 2 3 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
Protein XP_002304152.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002304152.4)
Subcellular
localization
TargetP
other 4  (predict for XP_002304152.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7475711

.
ppo-u.5
for
7472142

.
ppo-u.5
for
7477872

.
ppo-u.5
for
7491864

.
gma-u.5
for
100788208

.
gma-u.5
for
100780649

.
ath-u.5
for
AT2G35430

.
ath-u.5
for
AT3G19360

.
ath-u.5
for
AT1G32360

.
vvi-u.5
for
100247398

.
vvi-u.5
for
100262704

.
vvi-u.5
for
104880257

.
sly-u.5
for
101249238

.
sly-u.5
for
101263122

.
osa-u.5
for
4344715

.
zma-u.5
for
100193200

.


Ortholog ID: 1695
Species ath ath gma sly osa zma bra bra vvi vvi ppo ppo tae tae hvu ghi ghi bna bna cre sbi cit cit bdi bdi nta nta
Symbol AT2G35430 AT1G32360 LOC100780649 LOC101263122 LOC4344715 LOC100193200 LOC103859808 LOC103837309 LOC100262704 LOC100247398 LOC7472142 LOC7491864 LOC123157300 LOC123165620 LOC123408711 LOC107946756 LOC107953711 LOC106374659 LOC106379792 CHLRE_11g476200v5 LOC8080851 LOC102626224 LOC102619881 LOC100834329 LOC100835128 LOC107783171 LOC107804698
Function* Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger (CCCH-type) family protein zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 uncharacterized LOC100193200 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 uncharacterized protein zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 3
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 4
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03060 Protein export 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 3
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818109 840128 100780649 101263122 4344715 100193200 103859808 103837309 100262704 100247398 7472142 7491864 123157300 123165620 123408711 107946756 107953711 106374659 106379792 66055317 8080851 102626224 102619881 100834329 100835128 107783171 107804698
The preparation time of this page was 0.2 [sec].