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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7476297   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100787950   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   25502268   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-u.5   100242430   putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1   107907198   putative E3 ubiquitin-protein ligase LIN 
 sly-u.5   101248590   putative E3 ubiquitin-protein ligase LIN-1 
 sot-r.1   102605913   putative E3 ubiquitin-protein ligase LIN 
 nta-r.1   107787896   putative E3 ubiquitin-protein ligase LIN-1 
 nta-r.1   107796870   putative E3 ubiquitin-protein ligase LIN-1 
 osa-u.5   4325882   putative E3 ubiquitin-protein ligase LIN 
 zma-u.5   103651710   putative E3 ubiquitin-protein ligase LIN 
 hvu-r.1   123439681   putative E3 ubiquitin-protein ligase LIN 
 sbi-r.1   8077569   putative E3 ubiquitin-protein ligase LIN 
 bdi-r.1   100836629   putative E3 ubiquitin-protein ligase LIN 

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Top 50 coexpressed genes to 7476297 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476297 (ppo-m.4 coexpression data)

CoexMap"7476297"


ppoLOC7476297 | Entrez gene ID : 7476297    
Species ppo gma mtr vvi ghi sly sot nta osa zma hvu sbi bdi tae bna cre ath bra cit
Paralog 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (401 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024445505.2 [sequence] [blastp]
XP_024445506.2 [sequence] [blastp]
XP_024445507.2 [sequence] [blastp]
XP_024445508.2 [sequence] [blastp]
XP_024445509.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  plas 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_024445505.2)
nucl 3,  plas 2,  vacu 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_024445506.2)
nucl 3,  plas 2,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  golg_plas 1,  mito_plas 1  (predict for XP_024445507.2)
nucl 5,  plas 2,  cyto 1,  golg 1  (predict for XP_024445508.2)
nucl 4,  plas 2,  cyto 1,  golg_plas 1,  E.R._plas 1  (predict for XP_024445509.2)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024445505.2)
chlo 6  (predict for XP_024445506.2)
chlo 6  (predict for XP_024445507.2)
chlo 6  (predict for XP_024445508.2)
chlo 6  (predict for XP_024445509.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7476297
gma-u.5
for
100787950
mtr-u.5
for
25502268
vvi-u.5
for
100242430
ghi-r.1
for
107907198
sly-u.5
for
101248590
sot-r.1
for
102605913
nta-r.1
for
107787896
nta-r.1
for
107796870
osa-u.5
for
4325882
zma-u.5
for
103651710
hvu-r.1
for
123439681
sbi-r.1
for
8077569
bdi-r.1
for
100836629


Ortholog ID: 12775
Species gma mtr vvi ghi sly sot nta nta osa zma hvu sbi bdi
Symbol LOC100787950 LOC25502268 LOC100242430 LOC107907198 LOC101248590 LOC102605913 LOC107787896 LOC107796870 LOC4325882 LOC103651710 LOC123439681 LOC8077569 LOC100836629
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00940 Phenylpropanoid biosynthesis 2
sly00941 Flavonoid biosynthesis 2
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 6
sot00270 Cysteine and methionine metabolism 2
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 3
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787950 25502268 100242430 107907198 101248590 102605913 107787896 107796870 4325882 103651710 123439681 8077569 100836629
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