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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476933   serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 ppo-r.4   7476933   serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 ppo-m.4   7476933   serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 ppo-u.5   7487186   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 ppo-u.5   7479742   serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 ppo-u.5   7487707   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 gma-u.5   100815724   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 gma-u.5   100807531   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 gma-u.5   100792998   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 mtr-u.5   11424481   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 mtr-u.5   11434607   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 mtr-u.5   11435115   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 ath-u.5   AT5G28850   Calcium-binding EF-hand family protein 
 ath-u.5   AT5G28900   Calcium-binding EF-hand family protein 
 ath-u.5   AT5G44090   Calcium-binding EF-hand family protein 
 vvi-u.5   100250118   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 vvi-u.5   100246385   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 sly-u.5   101251680   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 sly-u.5   101245749   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 osa-u.5   4328580   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 osa-u.5   4348893   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 zma-u.5   100279229   uncharacterized LOC100279229 
 zma-u.5   103643458   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 zma-u.5   103626168   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 

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Top 50 coexpressed genes to 7476933 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476933 (ppo-u.5 coexpression data)

CoexMap"7476933"


ppoLOC7476933 | Entrez gene ID : 7476933    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 6 3 3 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03015 [list] [network] mRNA surveillance pathway (164 genes)
pop04382 [list] [network] Cornified envelope formation (45 genes)
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (162 genes)  IEA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (28 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (102 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (301 genes)  IEA  
Protein XP_002306866.1 [sequence] [blastp]
XP_024457726.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 5,  cyto 1  (predict for XP_002306866.1)
cyto 5,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024457726.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002306866.1)
other 5,  scret 5  (predict for XP_024457726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476933
ppo-r.4
for
7476933
ppo-m.4
for
7476933
ppo-u.5
for
7487186
ppo-u.5
for
7479742
ppo-u.5
for
7487707
gma-u.5
for
100815724
gma-u.5
for
100807531
gma-u.5
for
100792998
mtr-u.5
for
11424481
mtr-u.5
for
11434607
mtr-u.5
for
11435115
ath-u.5
for
AT5G28850
ath-u.5
for
AT5G28900
ath-u.5
for
AT5G44090
vvi-u.5
for
100250118
vvi-u.5
for
100246385
sly-u.5
for
101251680
sly-u.5
for
101245749
osa-u.5
for
4328580
osa-u.5
for
4348893
zma-u.5
for
100279229
zma-u.5
for
103643458
zma-u.5
for
103626168


Ortholog ID: 1552
Species ppo ppo gma gma mtr mtr ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC7479742 LOC7476933 LOC100799748 LOC100804366 LOC11435115 LOC11434607 AT5G44090 AT1G54450 LOC103874595 LOC103837305 LOC100250118 LOC100246385 LOC107892744 LOC107897886 LOC111211540 LOC111200864 LOC102625679 LOC102625238 LOC101245749 LOC101251680 LOC102590984 LOC102584799 LOC107790195 LOC107831426 LOC4328580 LOC4348893 LOC103643458 LOC103626168 LOC123181066 LOC123136794 LOC123402277 LOC123430999 LOC8079450 LOC8067423 LOC100829304 LOC100839320 CHLRE_06g260600v5
Function* serine/threonine protein phosphatase 2A regulatory subunit B''alpha serine/threonine protein phosphatase 2A regulatory subunit B''alpha probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04382 Cornified envelope formation 3
gma03015 mRNA surveillance pathway 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma04120 Ubiquitin mediated proteolysis 2
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 4
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 4
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00190 Oxidative phosphorylation 6
bra00020 Citrate cycle (TCA cycle) 6
bra01210 2-Oxocarboxylic acid metabolism 4
bra01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi03015 mRNA surveillance pathway 2
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna03018 RNA degradation 5
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03083 Polycomb repressive complex 4
bna03018 RNA degradation 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 7
sot04382 Cornified envelope formation 6
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 3
sot04142 Lysosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 4
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 5
zma04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03013 Nucleocytoplasmic transport 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae04382 Cornified envelope formation 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 4
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 4
sbi03013 Nucleocytoplasmic transport 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7479742 7476933 100799748 100804366 11435115 11434607 834432 841887 103874595 103837305 100250118 100246385 107892744 107897886 111211540 111200864 102625679 102625238 101245749 101251680 102590984 102584799 107790195 107831426 4328580 4348893 103643458 103626168 123181066 123136794 123402277 123430999 8079450 8067423 100829304 100839320 5722044
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