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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478666   uncharacterized LOC7478666 
 ppo-r.4   7478666   uncharacterized LOC7478666 
 ppo-m.4   7478666   uncharacterized LOC7478666 
 gma-u.5   100800755   uncharacterized LOC100800755 
 mtr-u.5   25485324   uncharacterized LOC25485324 
 mtr-u.5   11415212   uncharacterized LOC11415212 
 ath-u.5   AT1G49975   photosystem I reaction center subunit N 
 vvi-u.5   100247999   uncharacterized LOC100247999 
 osa-u.5   4333999   uncharacterized LOC4333999 
 zma-u.5   100275243   uncharacterized LOC100275243 

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Top 50 coexpressed genes to 7478666 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478666 (ppo-u.5 coexpression data)

CoexMap"7478666"


ppoLOC7478666 | Entrez gene ID : 7478666    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (119 genes)  IEA  
GO CC
GO:0009522 [list] [network] photosystem I  (16 genes)  IEA  
GO MF
Protein XP_002300278.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1,  E.R._vacu 1  (predict for XP_002300278.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002300278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478666

.
ppo-r.4
for
7478666

.
ppo-m.4
for
7478666

.
gma-u.5
for
100800755

.
mtr-u.5
for
25485324

.
mtr-u.5
for
11415212

.
ath-u.5
for
AT1G49975

.
vvi-u.5
for
100247999

.
osa-u.5
for
4333999

.
zma-u.5
for
100275243

.


Ortholog ID: 9835
Species ath gma osa zma bra vvi ppo mtr mtr tae tae hvu hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G49975 LOC100800755 LOC4333999 LOC100275243 LOC103871378 LOC100247999 LOC7478666 LOC25485324 LOC11415212 LOC123090986 LOC123090987 LOC123447670 LOC123447671 LOC121210817 BNAC06G02980D BNAA06G37650D CHLRE_02g086100v5 LOC8060526 LOC102584825 LOC102627099 LOC100834148 LOC107781256 LOC107777951
Function* photosystem I reaction center subunit N uncharacterized LOC100800755 uncharacterized LOC4333999 uncharacterized LOC100275243 uncharacterized LOC103871378 uncharacterized LOC100247999 uncharacterized LOC7478666 uncharacterized LOC25485324 uncharacterized LOC11415212 uncharacterized LOC123090986 uncharacterized LOC123090987 uncharacterized LOC123447670 uncharacterized LOC123447671 uncharacterized LOC121210817 uncharacterized BNAC06G02980D uncharacterized BNAA06G37650D uncharacterized protein uncharacterized LOC8060526 uncharacterized LOC102584825 uncharacterized LOC102627099 uncharacterized LOC100834148 uncharacterized LOC107781256 uncharacterized LOC107777951
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa01200 Carbon metabolism 2
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 7
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 5
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 4
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841421 100800755 4333999 100275243 103871378 100247999 7478666 25485324 11415212 123090986 123090987 123447670 123447671 121210817 106424411 106346148 5727394 8060526 102584825 102627099 100834148 107781256 107777951
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