Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479643   syntaxin-52 
 ppo-r.4   7479643   syntaxin-52 
 ppo-m.4   7479643   syntaxin-52 
 ppo-u.5   18106092   syntaxin-52 
 ppo-u.5   18106091   syntaxin-52 
 ppo-u.5   18099798   syntaxin-52 
 gma-u.5   100794038   syntaxin-52 
 gma-u.5   100799465   syntaxin-51 
 gma-u.5   100782666   syntaxin-51 
 mtr-u.5   11433054   syntaxin-51 
 mtr-u.5   25500903   syntaxin-52 
 mtr-u.5   11445318   syntaxin-52 
 ath-u.5   SYP51   syntaxin of plants 51 
 vvi-u.5   100250369   syntaxin-51 
 sly-u.5   101252340   syntaxin-51 
 sly-u.5   101262735   syntaxin-51 
 osa-u.5   4345157   syntaxin-52 
 osa-u.5   4328103   syntaxin-52 
 zma-u.5   100217094   SNARE domain containing protein 
 zma-u.5   100193337   Syntaxin-51 

close


Top 50 coexpressed genes to 7479643 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7479643 (ppo-u.5 coexpression data)

CoexMap"7479643"


ppoLOC7479643 | Entrez gene ID : 7479643    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04130 [list] [network] SNARE interactions in vesicular transport (63 genes)
GO BP
GO:0048278 [list] [network] vesicle docking  (39 genes)  IEA  
GO:0006906 [list] [network] vesicle fusion  (54 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0031201 [list] [network] SNARE complex  (53 genes)  IEA  
GO:0012505 [list] [network] endomembrane system  (1408 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (48 genes)  IEA  
GO:0000149 [list] [network] SNARE binding  (89 genes)  IEA  
Protein XP_024459943.2 [sequence] [blastp]
Subcellular
localization
wolf
golg 4,  cyto 2,  golg_plas 2,  nucl 1,  cyto_plas 1  (predict for XP_024459943.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_024459943.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479643

.
ppo-r.4
for
7479643

.
ppo-m.4
for
7479643

.
ppo-u.5
for
18106092

.
ppo-u.5
for
18106091

.
ppo-u.5
for
18099798

.
gma-u.5
for
100794038

.
gma-u.5
for
100799465

.
gma-u.5
for
100782666

.
mtr-u.5
for
11433054

.
mtr-u.5
for
25500903

.
mtr-u.5
for
11445318

.
ath-u.5
for
SYP51

.
vvi-u.5
for
100250369

.
sly-u.5
for
101252340

.
sly-u.5
for
101262735

.
osa-u.5
for
4345157

.
osa-u.5
for
4328103

.
zma-u.5
for
100217094

.
zma-u.5
for
100193337

.


Ortholog ID: 1997
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol SYP52 LOC100782666 LOC100794038 LOC101262735 LOC4345157 LOC4328103 LOC100217094 LOC100193337 LOC103842859 LOC103853203 LOC100250369 LOC18099798 LOC7479643 LOC11445318 LOC11433054 LOC123135773 LOC123172960 LOC123396140 LOC123402676 LOC107926302 LOC107917855 LOC106429697 LOC106396692 CHLRE_17g709350v5 LOC110436404 LOC102591530 LOC102597197 LOC102608030 LOC100825424 LOC100840335 LOC107819861 LOC107800731
Function* syntaxin of plants 52 syntaxin-51 syntaxin-52 syntaxin-51 syntaxin-52 syntaxin-52 SNARE domain containing protein Syntaxin-51 syntaxin-51 syntaxin-52 syntaxin-51 syntaxin-52 syntaxin-52 syntaxin-52 syntaxin-51 syntaxin-51 syntaxin-51 syntaxin-51-like syntaxin-51-like syntaxin-51 syntaxin-51 syntaxin-52 syntaxin-51 uncharacterized protein syntaxin-52-like syntaxin-52-like syntaxin-51-like syntaxin-51 syntaxin-52 syntaxin-52 syntaxin-51 syntaxin-52
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 4
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma04130 SNARE interactions in vesicular transport 3
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 4
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04141 Protein processing in endoplasmic reticulum 3
sly04130 SNARE interactions in vesicular transport 2
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
osa04120 Ubiquitin mediated proteolysis 3
osa04141 Protein processing in endoplasmic reticulum 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 7
zma04130 SNARE interactions in vesicular transport 5
zma03250 Viral life cycle - HIV-1 3
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 5
zma04130 SNARE interactions in vesicular transport 4
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
bra03022 Basal transcription factors 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04142 Lysosome 2
vvi04145 Phagosome 2
vvi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu00071 Fatty acid degradation 2
hvu00280 Valine, leucine and isoleucine degradation 2
hvu00310 Lysine degradation 2
hvu00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 6
ghi04144 Endocytosis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 6
ghi04144 Endocytosis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 8
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 3
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 4
sot04145 Phagosome 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit03010 Ribosome 2
cit00230 Purine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04144 Endocytosis 3
nta03083 Polycomb repressive complex 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844297 100782666 100794038 101262735 4345157 4328103 100217094 100193337 103842859 103853203 100250369 18099798 7479643 11445318 11433054 123135773 123172960 123396140 123402676 107926302 107917855 106429697 106396692 5717157 110436404 102591530 102597197 102608030 100825424 100840335 107819861 107800731
The preparation time of this page was 0.2 [sec].