ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7480017	VAN3-binding protein
ppo-r.4	7480017	VAN3-binding protein
ppo-m.4	7480017	VAN3-binding protein
ppo-u.5	7467503	VAN3-binding protein
ppo-u.5	7498060	VAN3-binding protein
gma-u.5	100784359	VAN3-binding protein
gma-u.5	100793202	VAN3-binding protein
gma-u.5	100793882	VAN3-binding protein
mtr-u.5	25482955	VAN3-binding protein
mtr-u.5	11425610	VAN3-binding protein
mtr-u.5	25485148	VAN3-binding protein
ath-u.5	AT3G22810	auxin canalization protein (DUF828)
ath-u.5	FKD1	FORKED 1
ath-u.5	AT4G14740	auxin canalization protein (DUF828)
vvi-u.5	100256307	VAN3-binding protein
vvi-u.5	100854030	VAN3-binding protein
sly-u.5	101254530	VAN3-binding protein
sly-u.5	101264972	VAN3-binding protein
osa-u.5	4352732	VAN3-binding protein
osa-u.5	4333519	VAN3-binding protein
zma-u.5	100278869	uncharacterized LOC100278869
zma-u.5	100383305	VAN3-binding protein
zma-u.5	103639593	VAN3-binding protein

Annotation

functional annotation

KEGG

GO BP

GO:0010305 [list] [network] leaf vascular tissue pattern formation	(7 genes)	IEA
GO:0010087 [list] [network] phloem or xylem histogenesis	(23 genes)	IEA
GO:0009734 [list] [network] auxin-activated signaling pathway	(29 genes)	IEA

GO CC

GO MF

Protein

XP_002302099.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, E.R. 2, cysk_nucl 2, nucl_plas 2

(predict for XP_002302099.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_002302099.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7480017	ppo-r.4 for 7480017	ppo-m.4 for 7480017	ppo-u.5 for 7467503	ppo-u.5 for 7498060	gma-u.5 for 100784359	gma-u.5 for 100793202	gma-u.5 for 100793882	mtr-u.5 for 25482955	mtr-u.5 for 11425610	mtr-u.5 for 25485148	ath-u.5 for AT3G22810	ath-u.5 for FKD1	ath-u.5 for AT4G14740	vvi-u.5 for 100256307	vvi-u.5 for 100854030	sly-u.5 for 101254530	sly-u.5 for 101264972	osa-u.5 for 4352732	osa-u.5 for 4333519	zma-u.5 for 100278869	zma-u.5 for 100383305	zma-u.5 for 103639593

Ortholog

Ortholog ID: 1745

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

VAN3-binding protein

auxin canalization protein (DUF828)

VAN3-binding protein

VAN3-binding protein-like

VAN3-binding protein

VAN3-binding protein-like

VAN3-binding protein

VAN3-binding protein-like

VAN3-binding protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	6
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	6
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	2
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

7498060

100814874

100793882

11425610

821852

834409

103871780

103833465

100854030

100256307

107931397

107930679

106412041

106347034

102623744

102621060

101264972

101254530

102598173

102600556

107774238

107781740

4333519

4352732

103639593

100383305

123113240

123110449

123396363

123452139

8062238

8076658

100828163

100833525

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7480017 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480017 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	3	2	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7480017 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480017 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**