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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480472   pentatricopeptide repeat-containing protein At2g17670 
 ppo-r.4   7480472   pentatricopeptide repeat-containing protein At2g17670 
 ppo-m.4   7480472   pentatricopeptide repeat-containing protein At2g17670 
 gma-u.5   100782321   pentatricopeptide repeat-containing protein At2g17670 
 mtr-u.5   11423312   pentatricopeptide repeat-containing protein At2g17670 
 ath-u.5   AT2G17670   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100852599   pentatricopeptide repeat-containing protein At2g17670 
 sly-u.5   101251536   pentatricopeptide repeat-containing protein At2g17670 

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Top 50 coexpressed genes to 7480472 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480472 (ppo-u.5 coexpression data)

CoexMap"7480472"


ppoLOC7480472 | Entrez gene ID : 7480472    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024458051.1 [sequence] [blastp]
XP_024458052.1 [sequence] [blastp]
XP_024458054.1 [sequence] [blastp]
XP_024458055.1 [sequence] [blastp]
XP_024458056.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_024458051.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_024458052.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_024458054.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_024458055.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_024458056.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024458051.1)
chlo 6  (predict for XP_024458052.1)
chlo 6  (predict for XP_024458054.1)
chlo 6  (predict for XP_024458055.1)
chlo 6  (predict for XP_024458056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480472

.
ppo-r.4
for
7480472

.
ppo-m.4
for
7480472

.
gma-u.5
for
100782321

.
mtr-u.5
for
11423312

.
ath-u.5
for
AT2G17670

.
vvi-u.5
for
100852599

.
sly-u.5
for
101251536

.


Ortholog ID: 13419
Species ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT2G17670 LOC100782321 LOC101251536 LOC103837816 LOC100852599 LOC7480472 LOC11423312 LOC107937842 LOC107918017 LOC106397318 LOC106366376 LOC102587006 LOC102623003 LOC107760967 LOC107822197
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 pentatricopeptide repeat-containing protein At2g17670 uncharacterized LOC107760967 pentatricopeptide repeat-containing protein At2g17670
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 3
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816274 100782321 101251536 103837816 100852599 7480472 11423312 107937842 107918017 106397318 106366376 102587006 102623003 107760967 107822197
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