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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7482482   pentatricopeptide repeat-containing protein At5g39680 
 gma-u.5   100783779   pentatricopeptide repeat-containing protein At5g39680 
 mtr-u.5   11422995   pentatricopeptide repeat-containing protein At5g39680 
 bra-r.6   103864216   pentatricopeptide repeat-containing protein At5g39680-like 
 bra-r.6   103850148   pentatricopeptide repeat-containing protein At5g39680 
 vvi-u.5   100242188   pentatricopeptide repeat-containing protein At5g39680 
 ghi-r.1   107911811   pentatricopeptide repeat-containing protein At5g39680 
 cit-r.1   102617103   pentatricopeptide repeat-containing protein At5g39680 
 sly-u.5   101256942   pentatricopeptide repeat-containing protein At5g39680 
 sot-r.1   102588774   pentatricopeptide repeat-containing protein At5g39680 
 nta-r.1   107793836   pentatricopeptide repeat-containing protein At5g39680 
 nta-r.1   107819294   pentatricopeptide repeat-containing protein At5g39680 
 osa-u.5   4339672   pentatricopeptide repeat-containing protein At5g39680 
 zma-u.5   103630757   pentatricopeptide repeat-containing protein At5g39680 
 hvu-r.1   123451170   pentatricopeptide repeat-containing protein At5g39680-like 
 bdi-r.1   100845678   pentatricopeptide repeat-containing protein At5g39680 

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Top 50 coexpressed genes to 7482482 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7482482 (ppo-m.4 coexpression data)

CoexMap"7482482"


ppoLOC7482482 | Entrez gene ID : 7482482    
Species ppo gma mtr bra vvi ghi cit sly sot nta osa zma hvu bdi tae sbi cre ath bna
Paralog 1 1 1 2 1 1 1 1 1 2 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024444438.1 [sequence] [blastp]
XP_024444439.1 [sequence] [blastp]
XP_024444440.1 [sequence] [blastp]
XP_024444441.1 [sequence] [blastp]
XP_024444442.1 [sequence] [blastp]
XP_052304224.1 [sequence] [blastp]
XP_052304225.1 [sequence] [blastp]
XP_052304226.1 [sequence] [blastp]
XP_052304227.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_024444438.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_024444439.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_024444440.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_024444441.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_024444442.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_052304224.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_052304225.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_052304226.1)
chlo 6,  nucl 1,  mito 1  (predict for XP_052304227.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_024444438.1)
mito 8  (predict for XP_024444439.1)
mito 8  (predict for XP_024444440.1)
mito 8  (predict for XP_024444441.1)
mito 8  (predict for XP_024444442.1)
mito 8  (predict for XP_052304224.1)
mito 8  (predict for XP_052304225.1)
mito 8  (predict for XP_052304226.1)
mito 8  (predict for XP_052304227.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7482482
gma-u.5
for
100783779
mtr-u.5
for
11422995
bra-r.6
for
103864216
bra-r.6
for
103850148
vvi-u.5
for
100242188
ghi-r.1
for
107911811
cit-r.1
for
102617103
sly-u.5
for
101256942
sot-r.1
for
102588774
nta-r.1
for
107793836
nta-r.1
for
107819294
osa-u.5
for
4339672
zma-u.5
for
103630757
hvu-r.1
for
123451170
bdi-r.1
for
100845678


Ortholog ID: 9705
Species gma mtr bra bra vvi ghi cit sly sot nta nta osa zma hvu bdi
Symbol LOC100783779 LOC11422995 LOC103864216 LOC103850148 LOC100242188 LOC107911811 LOC102617103 LOC101256942 LOC102588774 LOC107793836 LOC107819294 LOC4339672 LOC103630757 LOC123451170 LOC100845678
Function* pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100783779 11422995 103864216 103850148 100242188 107911811 102617103 101256942 102588774 107793836 107819294 4339672 103630757 123451170 100845678
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