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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484339   pentatricopeptide repeat-containing protein At2g34400 
 ppo-r.4   7484339   pentatricopeptide repeat-containing protein At2g34400 
 ppo-m.4   7484339   pentatricopeptide repeat-containing protein At2g34400 
 gma-u.5   100813380   pentatricopeptide repeat-containing protein At2g34400 
 gma-u.5   100786038   pentatricopeptide repeat-containing protein At2g34400 
 ath-u.5   AT2G34400   Pentatricopeptide repeat (PPR-like) superfamily protein 
 vvi-u.5   100255714   pentatricopeptide repeat-containing protein At2g34400 
 sly-u.5   101268772   pentatricopeptide repeat-containing protein At2g34400 
 osa-u.5   4338370   pentatricopeptide repeat-containing protein At2g34400 
 zma-u.5   103633526   pentatricopeptide repeat-containing protein At2g34400 

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Top 50 coexpressed genes to 7484339 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484339 (ppo-u.5 coexpression data)

CoexMap"7484339"


ppoLOC7484339 | Entrez gene ID : 7484339    
Species ppo gma ath vvi sly osa zma sbi nta mtr cre bra cit hvu bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002318172.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_002318172.2)
Subcellular
localization
TargetP
other 2  (predict for XP_002318172.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484339

.
ppo-r.4
for
7484339

.
ppo-m.4
for
7484339

.
gma-u.5
for
100813380

.
gma-u.5
for
100786038

.
ath-u.5
for
AT2G34400

.
vvi-u.5
for
100255714

.
sly-u.5
for
101268772

.
osa-u.5
for
4338370

.
zma-u.5
for
103633526

.


Ortholog ID: 7941
Species ath gma gma sly osa zma bra vvi tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT2G34400 LOC100813380 LOC100786038 LOC101268772 LOC4338370 LOC103633526 LOC103865333 LOC100255714 LOC123180433 LOC123424787 LOC107907361 LOC107907505 LOC106432783 LOC106447500 LOC8073138 LOC102600475 LOC102611189 LOC100845612 LOC107804099
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818003 100813380 100786038 101268772 4338370 103633526 103865333 100255714 123180433 123424787 107907361 107907505 106432783 106447500 8073138 102600475 102611189 100845612 107804099
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