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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7485160   berberine bridge enzyme-like 28 
 ppo-u.5   7480408   berberine bridge enzyme-like 13 
 ppo-u.5   112324786   berberine bridge enzyme-like 8 
 gma-u.5   100775353   berberine bridge enzyme-like 13 
 gma-u.5   100775893   berberine bridge enzyme-like 21 
 mtr-u.5   11416804   berberine bridge enzyme-like 13 
 ath-u.5   AT1G26380   FAD-binding Berberine family protein 
 ath-u.5   AT1G26390   FAD-binding Berberine family protein 
 vvi-u.5   100264985   berberine bridge enzyme-like 21 
 vvi-u.5   100248870   tetrahydroberberine oxidase 
 sly-u.5   101246398   berberine bridge enzyme-like 22 
 sly-u.5   101264571   berberine bridge enzyme-like 21 
 osa-u.5   107281167   uncharacterized LOC107281167 
 zma-u.5   100191218   uncharacterized LOC100191218 
 zma-u.5   103638604   berberine bridge enzyme-like 18 

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Top 50 coexpressed genes to 7485160 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485160 (ppo-m.4 coexpression data)

CoexMap"7485160"


ppoLOC7485160 | Entrez gene ID : 7485160    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 1 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0071949 [list] [network] FAD binding  (109 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1602 genes)  IEA  
Protein XP_002317695.3 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1  (predict for XP_002317695.3)
Subcellular
localization
TargetP
other 6  (predict for XP_002317695.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7485160

.
ppo-u.5
for
7480408

.
ppo-u.5
for
112324786

.
gma-u.5
for
100775353

.
gma-u.5
for
100775893

.
mtr-u.5
for
11416804

.
ath-u.5
for
AT1G26380

.
ath-u.5
for
AT1G26390

.
vvi-u.5
for
100264985

.
vvi-u.5
for
100248870

.
sly-u.5
for
101246398

.
sly-u.5
for
101264571

.
osa-u.5
for
107281167

.
zma-u.5
for
100191218

.
zma-u.5
for
103638604

.


Ortholog ID: 8
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae hvu hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol AT1G26380 AT1G26390 LOC100797188 LOC101256448 LOC101263376 LOC4341253 LOC4341254 LOC103629835 LOC103629842 LOC103865354 LOC103850258 LOC100253961 LOC100243731 LOC18109453 LOC11422989 LOC11407647 LOC123160322 LOC123411227 LOC123413019 LOC107914760 LOC107925005 LOC106375689 CHLRE_09g397253v5 LOC110430759 LOC102594583 LOC102586155 LOC102623495 LOC100833798 LOC107807513 LOC107763225
Function* FAD-binding Berberine family protein FAD-binding Berberine family protein berberine bridge enzyme-like 21 monolignol oxidoreductase AtBBE-like 13 tetrahydroberberine oxidase-like berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like 27 berberine bridge enzyme-like 27 berberine bridge enzyme-like 15 berberine bridge enzyme-like 1 tetrahydroberberine oxidase tetrahydroberberine oxidase berberine bridge enzyme-like 13 berberine bridge enzyme-like 22 berberine bridge enzyme-like 21 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like 18 berberine bridge enzyme-like 7 berberine bridge enzyme-like 22 uncharacterized protein berberine bridge enzyme-like 18 tetrahydrocannabinolic acid synthase-like reticuline oxidase-like protein tetrahydroberberine oxidase-like berberine bridge enzyme-like 28 berberine bridge enzyme-like 22 tetrahydroberberine oxidase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 4
osa01200 Carbon metabolism 3
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 4
ppo04016 MAPK signaling pathway - plant 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00052 Galactose metabolism 4
sbi00260 Glycine, serine and threonine metabolism 2
sbi00310 Lysine degradation 2
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839180 839181 100797188 101256448 101263376 4341253 4341254 103629835 103629842 103865354 103850258 100253961 100243731 18109453 11422989 11407647 123160322 123411227 123413019 107914760 107925005 106375689 66054712 110430759 102594583 102586155 102623495 100833798 107807513 107763225
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