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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485474   uncharacterized LOC7485474 
 ppo-r.4   7485474   uncharacterized LOC7485474 
 ppo-u.5   rpl36   ribosomal protein L36 
 ppo-u.5   7470098   uncharacterized LOC7470098 
 gma-u.5   rpl36   50S ribosomal protein L36 
 gma-u.5   100306418   ribosomal protein L36 
 gma-u.5   100306633   uncharacterized LOC100306633 
 mtr-u.5   11441217   uncharacterized LOC11441217 
 mtr-u.5   rpl36   ribosomal protein L36 
 ath-u.5   AT5G20180   Ribosomal protein L36 
 ath-u.5   rpl36   ribosomal protein L36 
 vvi-u.5   rpl36   50S ribosomal protein L36 
 vvi-u.5   100250810   uncharacterized LOC100250810 
 sly-u.5   rpl36   ribosomal protein L36 
 osa-u.5   rpl36   ribosomal protein L36 
 osa-u.5   4334544   uncharacterized LOC4334544 
 zma-u.5   rpl36   ribosomal protein L36 
 zma-u.5   103647620   50S ribosomal protein L36 2 
 zma-u.5   100282718   ribosomal L36 superfamily protein 

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Top 50 coexpressed genes to 7485474 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485474 (ppo-u.5 coexpression data)

CoexMap"7485474"


ppoLOC7485474 | Entrez gene ID : 7485474    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002308985.2 [sequence] [blastp]
XP_024459250.2 [sequence] [blastp]
XP_024459251.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 3  (predict for XP_002308985.2)
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 3  (predict for XP_024459250.2)
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 3  (predict for XP_024459251.2)
Subcellular
localization
TargetP
mito 2  (predict for XP_002308985.2)
mito 2  (predict for XP_024459250.2)
mito 2  (predict for XP_024459251.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485474

.
ppo-r.4
for
7485474

.
ppo-u.5
for
rpl36

.
ppo-u.5
for
7470098

.
gma-u.5
for
rpl36

.
gma-u.5
for
100306418

.
gma-u.5
for
100306633

.
mtr-u.5
for
11441217

.
mtr-u.5
for
rpl36

.
ath-u.5
for
AT5G20180

.
ath-u.5
for
rpl36

.
vvi-u.5
for
rpl36

.
vvi-u.5
for
100250810

.
sly-u.5
for
rpl36

.
osa-u.5
for
rpl36

.
osa-u.5
for
4334544

.
zma-u.5
for
rpl36

.
zma-u.5
for
103647620

.
zma-u.5
for
100282718

.


Ortholog ID: 3978
Species ath ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr mtr tae hvu ghi ghi bna sbi sbi sot cit cit bdi bdi nta
Symbol AT5G20180 rpl36 rpl36 LOC100306633 rpl36 rpl36 LOC4334544 LOC100282718 LOC103647620 LOC103851332 rpl36 LOC7470098 LOC7485474 LOC11441217 rpl36 LOC123105599 LOC123452943 LOC107901301 rpl36 LOC106386706 rpl36 LOC8057078 rpl36 rpl36 LOC102630844 LOC100830805 rpl36 rpl36
Function* Ribosomal protein L36 ribosomal protein L36 50S ribosomal protein L36 uncharacterized LOC100306633 ribosomal protein L36 ribosomal protein L36 uncharacterized LOC4334544 ribosomal L36 superfamily protein 50S ribosomal protein L36 2 uncharacterized LOC103851332 50S ribosomal protein L36 uncharacterized LOC7470098 uncharacterized LOC7485474 uncharacterized LOC11441217 ribosomal protein L36 uncharacterized LOC123105599 uncharacterized LOC123452943 uncharacterized LOC107901301 50S ribosomal protein L36 uncharacterized LOC106386706 ribosomal protein L36 uncharacterized LOC8057078 ribosomal protein L36 ribosomal protein L36 hypothetical protein uncharacterized LOC100830805 ribosomal protein L36 ribosomal protein L36
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03020 RNA polymerase 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly03020 RNA polymerase 4
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr03010 Ribosome 2
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03010 Ribosome 3
tae04142 Lysosome 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00190 Oxidative phosphorylation 5
sbi00195 Photosynthesis 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00195 Photosynthesis 3
sot03020 RNA polymerase 3
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00970 Aminoacyl-tRNA biosynthesis 4
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00190 Oxidative phosphorylation 5
nta00195 Photosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832141 844725 3989331 100306633 3950379 3131430 4334544 100282718 103647620 103851332 4025133 7470098 7485474 11441217 5333196 123105599 123452943 107901301 3989138 106386706 4549085 8057078 4099878 4271186 102630844 100830805 6439842 7564684
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