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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100306418   ribosomal protein L36 
 gma-r.7   100306418   ribosomal protein L36 
 gma-m.5   100306418   ribosomal protein L36 
 gma-u.5   100306633   uncharacterized LOC100306633 
 gma-u.5   rpl36   50S ribosomal protein L36 
 mtr-u.5   11441217   uncharacterized LOC11441217 
 mtr-u.5   rpl36   ribosomal protein L36 
 ppo-u.5   rpl36   ribosomal protein L36 
 ppo-u.5   7485474   uncharacterized LOC7485474 
 ppo-u.5   7470098   uncharacterized LOC7470098 
 ath-u.5   AT5G20180   Ribosomal protein L36 
 ath-u.5   rpl36   ribosomal protein L36 
 bra-r.6   103851332   uncharacterized LOC103851332 
 vvi-u.5   rpl36   50S ribosomal protein L36 
 vvi-u.5   100250810   uncharacterized LOC100250810 
 ghi-r.1   107901301   uncharacterized LOC107901301 
 ghi-r.1   rpl36   50S ribosomal protein L36 
 ghi-r.1   107962613   uncharacterized LOC107962613 
 bna-r.1   BNAA03G07980D   uncharacterized BNAA03G07980D 
 bna-r.1   106386706   uncharacterized LOC106386706 
 cit-r.1   102630844   hypothetical protein 
 cit-r.1   rpl36   ribosomal protein L36 
 sly-u.5   rpl36   ribosomal protein L36 
 sot-r.1   rpl36   ribosomal protein L36 
 nta-r.1   rpl36   ribosomal protein L36 
 osa-u.5   rpl36   ribosomal protein L36 
 osa-u.5   4334544   uncharacterized LOC4334544 
 zma-u.5   103647620   50S ribosomal protein L36 2 
 zma-u.5   rpl36   ribosomal protein L36 
 zma-u.5   100282718   ribosomal L36 superfamily protein 
 tae-r.2   123123416   uncharacterized LOC123123416 
 tae-r.2   123105599   uncharacterized LOC123105599 
 hvu-r.1   123452943   uncharacterized LOC123452943 
 sbi-r.1   8057078   uncharacterized LOC8057078 
 sbi-r.1   rpl36   ribosomal protein L36 
 bdi-r.1   100830805   uncharacterized LOC100830805 
 bdi-r.1   rpl36   ribosomal protein L36 

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Top 50 coexpressed genes to 100306418 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100306418 (gma-u.5 coexpression data)

CoexMap"100306418"


gmaLOC100306418 | Entrez gene ID : 100306418      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 3 2 1 2 3 2 2 1 1 1 2 3 2 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein NP_001238540.1 [sequence] [blastp]
XP_014624769.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto_nucl 2,  chlo_mito 2,  cyto 1  (predict for NP_001238540.1)
chlo 4,  nucl 2,  cyto_nucl 2,  chlo_mito 2,  cyto 1  (predict for XP_014624769.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001238540.1)
chlo 3  (predict for XP_014624769.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100306418
gma-r.7
for
100306418
gma-m.5
for
100306418
gma-u.5
for
100306633
gma-u.5
for
rpl36
mtr-u.5
for
11441217
mtr-u.5
for
rpl36
ppo-u.5
for
rpl36
ppo-u.5
for
7485474
ppo-u.5
for
7470098
ath-u.5
for
AT5G20180
ath-u.5
for
rpl36
bra-r.6
for
103851332
vvi-u.5
for
rpl36
vvi-u.5
for
100250810
ghi-r.1
for
107901301
ghi-r.1
for
rpl36
ghi-r.1
for
107962613
bna-r.1
for
BNAA03G07980D
bna-r.1
for
106386706
cit-r.1
for
102630844
cit-r.1
for
rpl36
sly-u.5
for
rpl36
sot-r.1
for
rpl36
nta-r.1
for
rpl36
osa-u.5
for
rpl36
osa-u.5
for
4334544
zma-u.5
for
103647620
zma-u.5
for
rpl36
zma-u.5
for
100282718
tae-r.2
for
123123416
tae-r.2
for
123105599
hvu-r.1
for
123452943
sbi-r.1
for
8057078
sbi-r.1
for
rpl36
bdi-r.1
for
100830805
bdi-r.1
for
rpl36


Ortholog ID: 3978
Species gma gma gma mtr mtr ppo ppo ppo ath ath bra vvi vvi ghi ghi ghi bna cit cit sly sot nta osa osa zma zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC100306418 LOC100306633 rpl36 LOC11441217 rpl36 rpl36 LOC7485474 LOC7470098 AT5G20180 rpl36 LOC103851332 rpl36 LOC100250810 LOC107901301 rpl36 LOC107962613 LOC106386706 LOC102630844 rpl36 rpl36 rpl36 rpl36 rpl36 LOC4334544 LOC103647620 rpl36 LOC100282718 LOC123105599 LOC123113909 LOC123452943 LOC8057078 rpl36 LOC100830805 rpl36
Function* ribosomal protein L36 uncharacterized LOC100306633 50S ribosomal protein L36 uncharacterized LOC11441217 ribosomal protein L36 ribosomal protein L36 uncharacterized LOC7485474 uncharacterized LOC7470098 Ribosomal protein L36 ribosomal protein L36 uncharacterized LOC103851332 50S ribosomal protein L36 uncharacterized LOC100250810 uncharacterized LOC107901301 50S ribosomal protein L36 uncharacterized LOC107962613 uncharacterized LOC106386706 hypothetical protein ribosomal protein L36 ribosomal protein L36 ribosomal protein L36 ribosomal protein L36 ribosomal protein L36 uncharacterized LOC4334544 50S ribosomal protein L36 2 ribosomal protein L36 ribosomal L36 superfamily protein uncharacterized LOC123105599 uncharacterized LOC123113909 uncharacterized LOC123452943 uncharacterized LOC8057078 ribosomal protein L36 uncharacterized LOC100830805 ribosomal protein L36
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03020 RNA polymerase 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr03010 Ribosome 2
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo00190 Oxidative phosphorylation 3
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00970 Aminoacyl-tRNA biosynthesis 4
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly03020 RNA polymerase 4
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00195 Photosynthesis 3
sot03020 RNA polymerase 3
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00190 Oxidative phosphorylation 5
nta00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03010 Ribosome 3
tae04142 Lysosome 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00190 Oxidative phosphorylation 5
sbi00195 Photosynthesis 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100306418 100306633 3989331 11441217 5333196 4929707 7485474 7470098 832141 844725 103851332 4025133 100250810 107901301 3989138 107962613 106386706 102630844 4271186 3950379 4099878 7564684 3131430 4334544 103647620 845223 100282718 123105599 123113909 123452943 8057078 4549085 100830805 6439842
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