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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485626   high mobility group B protein 9 
 ppo-r.4   7485626   high mobility group B protein 9 
 ppo-m.4   7485626   high mobility group B protein 9 
 ppo-u.5   18107070   high mobility group B protein 15 
 ppo-u.5   18103569   high mobility group B protein 10 
 gma-u.5   100807028   high mobility group B protein 15 
 gma-u.5   100783284   high mobility group B protein 15 
 mtr-u.5   11414168   high mobility group B protein 10 
 mtr-u.5   11440754   high mobility group B protein 15 
 ath-u.5   AT3G13350   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein 
 ath-u.5   AT1G04880   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein 
 vvi-u.5   100266033   high mobility group B protein 9 
 vvi-u.5   100260501   high mobility group B protein 15 
 vvi-u.5   100244598   high mobility group B protein 10 
 sly-u.5   101265586   high mobility group B protein 15 
 sly-u.5   101251156   high mobility group B protein 10 
 sly-u.5   101249807   high mobility group B protein 9 
 osa-u.5   4329340   high mobility group B protein 15 
 zma-u.5   100280617   HMG box family protein 
 zma-u.5   100277834   uncharacterized LOC100277834 

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Top 50 coexpressed genes to 7485626 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485626 (ppo-u.5 coexpression data)

CoexMap"7485626"


ppoLOC7485626 | Entrez gene ID : 7485626    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 2 2 2 3 3 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_002307758.2 [sequence] [blastp]
XP_024456935.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  plas 1,  golg_plas 1  (predict for XP_002307758.2)
nucl 9,  plas 1  (predict for XP_024456935.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002307758.2)
other 7  (predict for XP_024456935.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485626
ppo-r.4
for
7485626
ppo-m.4
for
7485626
ppo-u.5
for
18107070
ppo-u.5
for
18103569
gma-u.5
for
100807028
gma-u.5
for
100783284
mtr-u.5
for
11414168
mtr-u.5
for
11440754
ath-u.5
for
AT3G13350
ath-u.5
for
AT1G04880
vvi-u.5
for
100266033
vvi-u.5
for
100260501
vvi-u.5
for
100244598
sly-u.5
for
101265586
sly-u.5
for
101251156
sly-u.5
for
101249807
osa-u.5
for
4329340
zma-u.5
for
100280617
zma-u.5
for
100277834


Ortholog ID: 1577
Species ppo gma gma mtr ath vvi vvi ghi ghi cit cit sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC18103569 LOC100789037 LOC100784746 LOC11440754 AT3G13350 LOC100266033 LOC100244598 LOC107919872 LOC107916804 LOC102625335 LOC102613632 LOC101249807 LOC101251156 LOC102578765 LOC102602134 LOC107803693 LOC107831352 LOC4329340 LOC100280617 LOC100277834 LOC123137041 LOC123144497 LOC123402051 LOC8084502 LOC100842658 CHLRE_13g571050v5
Function* high mobility group B protein 10 high mobility group B protein 10-like high mobility group B protein 9 high mobility group B protein 15 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein high mobility group B protein 9 high mobility group B protein 10 high mobility group B protein 10 high mobility group B protein 15 high mobility group B protein 9 high mobility group B protein 15 high mobility group B protein 9 high mobility group B protein 10 high mobility group B protein 15-like high mobility group B protein 10 high mobility group B protein 10-like high mobility group B protein 9 high mobility group B protein 15 HMG box family protein uncharacterized LOC100277834 high mobility group B protein 9 high mobility group B protein 9 high mobility group B protein 9-like high mobility group B protein 15 high mobility group B protein 15 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma01230 Biosynthesis of amino acids 4
gma00030 Pentose phosphate pathway 3
gma00710 Carbon fixation by Calvin cycle 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00260 Glycine, serine and threonine metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly01230 Biosynthesis of amino acids 4
sly00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi01230 Biosynthesis of amino acids 3
bdi00051 Fructose and mannose metabolism 2
bdi00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18103569 100789037 100784746 11440754 820535 100266033 100244598 107919872 107916804 102625335 102613632 101249807 101251156 102578765 102602134 107803693 107831352 4329340 100280617 100277834 123137041 123144497 123402051 8084502 100842658 5719135
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