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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7485818   uncharacterized LOC7485818 
 ppo-u.5   112323277   vicilin-like seed storage protein At2g18540 
 ppo-u.5   7455424   uncharacterized LOC7455424 
 ppo-u.5   7460463   uncharacterized LOC7460463 
 gma-u.5   100814323   calponin homology domain-containing protein DDB_G0272472 
 gma-u.5   100793005   calponin homology domain-containing protein DDB_G0272472 
 mtr-u.5   112416763   myb-like protein V 
 mtr-u.5   112421058   uncharacterized LOC112421058 
 ath-u.5   AT2G47350   HIT zinc finger and PAPA-1-like domain-containing protein 
 ath-u.5   AT3G06660   PAPA-1-like family protein / zinc finger (HIT type) family protein 
 ath-u.5   AT1G56460   HIT zinc finger and PAPA-1-like domain-containing protein 
 vvi-u.5   100261960   uncharacterized LOC100261960 
 vvi-u.5   100246939   uncharacterized LOC100246939 
 sly-u.5   101249962   actin cytoskeleton-regulatory complex protein PAN1 
 sly-u.5   101265365   uncharacterized LOC101265365 
 osa-u.5   4334541   uncharacterized LOC4334541 
 osa-u.5   4352518   serine/arginine repetitive matrix protein 2 
 zma-u.5   100502463   HIT zinc finger 
 zma-u.5   100281422   uncharacterized LOC100281422 
 zma-u.5   100279309   HIT zinc finger 

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Top 50 coexpressed genes to 7485818 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485818 (ppo-m.4 coexpression data)

CoexMap"7485818"


ppoLOC7485818 | Entrez gene ID : 7485818    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (144 genes)  IEA  
GO CC
GO:0031011 [list] [network] Ino80 complex  (26 genes)  IEA  
GO MF
Protein XP_024465594.1 [sequence] [blastp]
XP_024465595.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024465594.1)
nucl 9,  cyto 1  (predict for XP_024465595.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_024465594.1)
other 5,  mito 3  (predict for XP_024465595.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7485818
ppo-u.5
for
112323277
ppo-u.5
for
7455424
ppo-u.5
for
7460463
gma-u.5
for
100814323
gma-u.5
for
100793005
mtr-u.5
for
112416763
mtr-u.5
for
112421058
ath-u.5
for
AT2G47350
ath-u.5
for
AT3G06660
ath-u.5
for
AT1G56460
vvi-u.5
for
100261960
vvi-u.5
for
100246939
sly-u.5
for
101249962
sly-u.5
for
101265365
osa-u.5
for
4334541
osa-u.5
for
4352518
zma-u.5
for
100502463
zma-u.5
for
100281422
zma-u.5
for
100279309


Ortholog ID: 1968
Species ppo ppo gma gma mtr mtr ath ath bra bra vvi ghi ghi bna bna cit cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC7471108 LOC7460463 LOC100793005 LOC100814323 LOC112421058 LOC112416763 AT1G56460 AT3G06660 LOC103866388 LOC103849764 LOC100261960 LOC107886359 LOC107938649 LOC106390540 LOC111214157 LOC102621326 LOC102607806 LOC101249962 LOC102579727 LOC107809835 LOC107799098 LOC4352518 LOC4334541 LOC100279309 LOC100281422 LOC123105593 LOC123110757 LOC123452937 LOC123395343 LOC8068839 LOC8057081 LOC100842627 LOC100827327
Function* uncharacterized LOC7471108 uncharacterized LOC7460463 calponin homology domain-containing protein DDB_G0272472 calponin homology domain-containing protein DDB_G0272472 uncharacterized LOC112421058 myb-like protein V HIT zinc finger and PAPA-1-like domain-containing protein PAPA-1-like family protein / zinc finger (HIT type) family protein hepatoma-derived growth factor-related protein 2 INO80 complex subunit B uncharacterized LOC100261960 uncharacterized LOC107886359 uncharacterized LOC107938649 uncharacterized LOC106390540 INO80 complex subunit B-like uncharacterized LOC102621326 uncharacterized LOC102607806 actin cytoskeleton-regulatory complex protein PAN1 uncharacterized LOC102579727 uncharacterized LOC107809835 uncharacterized LOC107799098 serine/arginine repetitive matrix protein 2 uncharacterized LOC4334541 HIT zinc finger uncharacterized LOC100281422 INO80 complex subunit B eukaryotic translation initiation factor 5B INO80 complex subunit B-like eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B uncharacterized LOC8057081 INO80 complex subunit B cylicin-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 4
ppo04814 Motor proteins 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7471108 7460463 100793005 100814323 112421058 112416763 842099 819851 103866388 103849764 100261960 107886359 107938649 106390540 111214157 102621326 102607806 101249962 102579727 107809835 107799098 4352518 4334541 100279309 100281422 123105593 123110757 123452937 123395343 8068839 8057081 100842627 100827327
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