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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487099   actin-related protein 4 
 ppo-r.4   7487099   actin-related protein 4 
 ppo-m.4   7487099   actin-related protein 4 
 ppo-u.5   18105693   actin-related protein 4 
 gma-u.5   100795390   actin-related protein 4 
 gma-u.5   100819549   actin-related protein 4 
 mtr-u.5   25502581   actin-related protein 4 
 mtr-u.5   11439919   actin-related protein 4 
 ath-u.5   ARP4   actin-related protein 4 
 bra-r.6   103835906   actin-related protein 4 
 bra-r.6   103872651   actin-related protein 4 
 vvi-u.5   100266467   actin-related protein 4 
 ghi-r.1   121203564   actin-related protein 4 
 ghi-r.1   107945368   actin-related protein 4 
 bna-r.1   106427180   actin-related protein 4 
 bna-r.1   106346906   actin-related protein 4-like 
 bna-r.1   106361997   actin-related protein 4-like 
 cit-r.1   102619533   actin-related protein 4 
 sly-u.5   101260909   actin-related protein 4 
 sot-r.1   102600647   actin-related protein 4 
 nta-r.1   107818079   actin-related protein 4 
 nta-r.1   107811968   actin-related protein 4 
 nta-r.1   107777825   actin-related protein 4 
 osa-u.5   4344621   actin-related protein 4-like 
 zma-u.5   100279759   uncharacterized LOC100279759 
 tae-r.2   123104760   actin-related protein 4 
 tae-r.2   123113050   actin-related protein 4 
 tae-r.2   123122570   actin-related protein 4 
 hvu-r.1   123401347   actin-related protein 4 
 hvu-r.1   123451923   actin-related protein 4-like 
 sbi-r.1   8078015   actin-related protein 4 
 bdi-r.1   100833000   actin-related protein 4 
 cre-r.1   CHLRE_06g249300v5   uncharacterized protein 

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Top 50 coexpressed genes to 7487099 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487099 (ppo-u.5 coexpression data)

CoexMap"7487099"


ppoLOC7487099 | Entrez gene ID : 7487099    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 2 1 2 3 1 1 1 3 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03082 [list] [network] ATP-dependent chromatin remodeling (85 genes)
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0016514 [list] [network] SWI/SNF complex  (9 genes)  IEA  
GO:0035267 [list] [network] NuA4 histone acetyltransferase complex  (14 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (170 genes)  IEA  
Protein XP_002317939.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1  (predict for XP_002317939.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002317939.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487099
ppo-r.4
for
7487099
ppo-m.4
for
7487099
ppo-u.5
for
18105693
gma-u.5
for
100795390
gma-u.5
for
100819549
mtr-u.5
for
25502581
mtr-u.5
for
11439919
ath-u.5
for
ARP4
bra-r.6
for
103835906
bra-r.6
for
103872651
vvi-u.5
for
100266467
ghi-r.1
for
121203564
ghi-r.1
for
107945368
bna-r.1
for
106427180
bna-r.1
for
106346906
bna-r.1
for
106361997
cit-r.1
for
102619533
sly-u.5
for
101260909
sot-r.1
for
102600647
nta-r.1
for
107818079
nta-r.1
for
107811968
nta-r.1
for
107777825
osa-u.5
for
4344621
zma-u.5
for
100279759
tae-r.2
for
123104760
tae-r.2
for
123113050
tae-r.2
for
123122570
hvu-r.1
for
123401347
hvu-r.1
for
123451923
sbi-r.1
for
8078015
bdi-r.1
for
100833000
cre-r.1
for
CHLRE_06g249300v5


Ortholog ID: 5199
Species ppo ppo gma gma mtr mtr ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC7487099 LOC18105693 LOC100819549 LOC100785066 LOC25502581 LOC11439919 ARP4 LOC103835906 LOC103872651 LOC100266467 LOC121203564 LOC107945368 LOC106427180 LOC106361997 LOC106412164 LOC102619533 LOC101260909 LOC102600647 LOC107818079 LOC107811968 LOC107777825 LOC4344621 LOC100279759 LOC123113050 LOC123122570 LOC123136681 LOC123401347 LOC123451923 LOC8078015 LOC100833000 CHLRE_06g249300v5
Function* actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4-like actin-related protein 4-like actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4-like uncharacterized LOC100279759 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4 actin-related protein 4-like actin-related protein 4 actin-related protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00564 Glycerophospholipid metabolism 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
gma03410 Base excision repair 2
gma00460 Cyanoamino acid metabolism 2
gma00500 Starch and sucrose metabolism 2
gma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 4
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 4
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03420 Nucleotide excision repair 2
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03082 ATP-dependent chromatin remodeling 2
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi03030 DNA replication 3
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre00510 N-Glycan biosynthesis 2
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7487099 18105693 100819549 100785066 25502581 11439919 838425 103835906 103872651 100266467 121203564 107945368 106427180 106361997 106412164 102619533 101260909 102600647 107818079 107811968 107777825 4344621 100279759 123113050 123122570 123136681 123401347 123451923 8078015 100833000 5722232
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