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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487240   vacuolar protein sorting-associated protein 26B 
 ppo-r.4   7487240   vacuolar protein sorting-associated protein 26B 
 ppo-m.4   7487240   vacuolar protein sorting-associated protein 26B 
 ppo-u.5   18107896   vacuolar protein sorting-associated protein 26B 
 ppo-u.5   18094945   vacuolar protein sorting-associated protein 26A 
 ppo-u.5   7488176   vacuolar protein sorting-associated protein 26A 
 gma-u.5   100813795   vacuolar protein sorting-associated protein 26A 
 gma-u.5   100813307   vacuolar protein sorting-associated protein 26A 
 gma-u.5   100788855   vacuolar protein sorting-associated protein 26-like 
 mtr-u.5   25500380   vacuolar protein sorting-associated protein 26B 
 mtr-u.5   25488835   vacuolar protein sorting-associated protein 26A 
 ath-u.5   VPS26B   vacuolar protein sorting 26B 
 ath-u.5   VPS26A   vacuolar protein sorting 26A 
 vvi-u.5   100250336   vacuolar protein sorting-associated protein 26A 
 vvi-u.5   100246120   vacuolar protein sorting-associated protein 26B 
 sly-u.5   101247715   vacuolar protein sorting-associated protein 26A 
 osa-u.5   4350961   vacuolar protein sorting-associated protein 26A 
 osa-u.5   4352271   vacuolar protein sorting-associated protein 26A 
 zma-u.5   100282332   uncharacterized LOC100282332 
 zma-u.5   100193449   vacuolar protein sorting 26 

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Top 50 coexpressed genes to 7487240 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487240 (ppo-u.5 coexpression data)

CoexMap"7487240"


ppoLOC7487240 | Entrez gene ID : 7487240    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04144 [list] [network] Endocytosis (195 genes)
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (26 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0030904 [list] [network] retromer complex  (9 genes)  IEA  
GO:0005768 [list] [network] endosome  (204 genes)  IEA  
GO MF
Protein XP_002308142.1 [sequence] [blastp]
XP_006381179.1 [sequence] [blastp]
XP_052309470.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  extr 1,  nucl 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002308142.1)
chlo 4,  cyto 2,  extr 1,  nucl 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_006381179.1)
chlo 4,  cyto 2,  extr 1,  nucl 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052309470.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_002308142.1)
other 5,  chlo 3  (predict for XP_006381179.1)
other 5,  chlo 3  (predict for XP_052309470.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487240

.
ppo-r.4
for
7487240

.
ppo-m.4
for
7487240

.
ppo-u.5
for
18107896

.
ppo-u.5
for
18094945

.
ppo-u.5
for
7488176

.
gma-u.5
for
100813795

.
gma-u.5
for
100813307

.
gma-u.5
for
100788855

.
mtr-u.5
for
25500380

.
mtr-u.5
for
25488835

.
ath-u.5
for
VPS26B

.
ath-u.5
for
VPS26A

.
vvi-u.5
for
100250336

.
vvi-u.5
for
100246120

.
sly-u.5
for
101247715

.
osa-u.5
for
4350961

.
osa-u.5
for
4352271

.
zma-u.5
for
100282332

.
zma-u.5
for
100193449

.


Ortholog ID: 3608
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol VPS26A VPS26B LOC100788855 LOC100813795 LOC101247715 LOC4352271 LOC4350961 LOC100193449 LOC100282332 LOC103867546 LOC103844828 LOC100246120 LOC100250336 LOC7487240 LOC18094945 LOC25488835 LOC25500380 LOC123086144 LOC123096950 LOC123448358 LOC107929612 LOC107891477 LOC106418473 LOC106390638 CHLRE_09g414200v5 LOC8064101 LOC102577746 LOC102627912 LOC100825760 LOC100829932 LOC107828108 LOC107795417
Function* vacuolar protein sorting 26A vacuolar protein sorting 26B vacuolar protein sorting-associated protein 26-like vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting 26 uncharacterized LOC100282332 vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26B vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A uncharacterized protein vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26-like protein vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A vacuolar protein sorting-associated protein 26A-like vacuolar protein sorting-associated protein 26A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04142 Lysosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 12
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04130 SNARE interactions in vesicular transport 3
vvi00190 Oxidative phosphorylation 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 6
ghi04144 Endocytosis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi00051 Fructose and mannose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre04145 Phagosome 3
cre04148 Efferocytosis 2
cre00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00510 N-Glycan biosynthesis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot03040 Spliceosome 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi00190 Oxidative phosphorylation 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835435 828883 100788855 100813795 101247715 4352271 4350961 100193449 100282332 103867546 103844828 100246120 100250336 7487240 18094945 25488835 25500380 123086144 123096950 123448358 107929612 107891477 106418473 106390638 5722342 8064101 102577746 102627912 100825760 100829932 107828108 107795417
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