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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7487381   putative transcription factor bHLH086 
 mtr-u.5   11426918   putative transcription factor bHLH086 
 ath-u.5   RHD6   ROOT HAIR DEFECTIVE6 
 osa-u.5   4330488   putative transcription factor bHLH086 
 zma-u.5   103636726   transcription factor BHLH089 

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Top 50 coexpressed genes to 7487381 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487381 (ppo-m.4 coexpression data)

CoexMap"7487381"


ppoLOC7487381 | Entrez gene ID : 7487381    
Species ppo mtr ath osa zma sly sbi nta bra cre vvi cit hvu bdi sot tae bna ghi gma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (266 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (338 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (520 genes)  IEA  
Protein XP_002305203.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002305203.3)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_002305203.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7487381

.
mtr-u.5
for
11426918

.
ath-u.5
for
RHD6

.
osa-u.5
for
4330488

.
zma-u.5
for
103636726

.


Ortholog ID: 3504
Species ath osa zma mtr hvu nta
Symbol RHD6 LOC4330488 LOC103636726 LOC11426918 LOC123405617 LOC107785173
Function* ROOT HAIR DEFECTIVE6 putative transcription factor bHLH086 transcription factor BHLH089 putative transcription factor bHLH086 putative transcription factor bHLH086 putative transcription factor bHLH086
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842965 4330488 103636726 11426918 123405617 107785173
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