ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7493242	RING-H2 finger protein ATL33
ppo-r.4	7493242	RING-H2 finger protein ATL33
ppo-m.4	7493242	RING-H2 finger protein ATL33
gma-u.5	100810869	RING-H2 finger protein ATL33
mtr-u.5	25498439	RING-H2 finger protein ATL33
mtr-u.5	11414306	RING-H2 finger protein ATL33
ath-u.5	AT2G37580	RING/U-box superfamily protein
vvi-u.5	100256289	RING-H2 finger protein ATL33
sly-u.5	101256321	RING-H2 finger protein ATL33

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(417 genes)

IEA

GO CC

GO MF

Protein

XP_002304737.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, E.R. 2, plas 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_002304737.1)

Subcellular
localization
TargetP

other 7

(predict for XP_002304737.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7493242	ppo-r.4 for 7493242	ppo-m.4 for 7493242	gma-u.5 for 100810869	mtr-u.5 for 25498439	mtr-u.5 for 11414306	ath-u.5 for AT2G37580	vvi-u.5 for 100256289	sly-u.5 for 101256321

Ortholog ID: 11666

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

sly

sot

nta

Symbol

Function^*

RING-H2 finger protein ATL33

RING/U-box superfamily protein

RING-H2 finger protein ATL33

RING-H2 finger protein ATL33-like

RING-H2 finger protein ATL33

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	4
ppo00270	Cysteine and methionine metabolism	3
ppo00670	One carbon pool by folate	3
ppo00040	Pentose and glucuronate interconversions	2
ppo00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta01230	Biosynthesis of amino acids	2
nta00280	Valine, leucine and isoleucine degradation	2
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7493242

100810869

11414306

25498439

818334

103865609

103857720

100256289

107889697

107948879

106385168

106392875

101256321

102580129

142166251

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7493242 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7493242 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	hvu	zma	bna	cit	bra	ghi	osa	sbi	bdi	nta	tae	cre	sot
Paralog	3	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7493242 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7493242 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**