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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493594   uncharacterized LOC7493594 
 ppo-r.4   7493594   uncharacterized LOC7493594 
 ppo-m.4   7493594   uncharacterized LOC7493594 
 gma-u.5   100806572   probable RNA-binding protein 18 
 mtr-u.5   25496421   probable RNA-binding protein 18 
 mtr-u.5   25479712   probable RNA-binding protein 18 
 ath-u.5   AT5G52545   RNA-binding protein-like RNA recognition motif protein 
 vvi-u.5   100259304   uncharacterized LOC100259304 
 osa-u.5   4349230   uncharacterized LOC4349230 
 zma-u.5   100285538   ATP binding protein 

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Top 50 coexpressed genes to 7493594 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493594 (ppo-u.5 coexpression data)

CoexMap"7493594"


ppoLOC7493594 | Entrez gene ID : 7493594    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002305243.2 [sequence] [blastp]
XP_024455797.1 [sequence] [blastp]
XP_024455798.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  mito 3  (predict for XP_002305243.2)
nucl 5,  nucl_plas 4,  mito 3,  plas 1  (predict for XP_024455797.1)
nucl 6,  nucl_plas 4,  chlo 2  (predict for XP_024455798.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002305243.2)
other 9  (predict for XP_024455797.1)
other 8  (predict for XP_024455798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493594

.
ppo-r.4
for
7493594

.
ppo-m.4
for
7493594

.
gma-u.5
for
100806572

.
mtr-u.5
for
25496421

.
mtr-u.5
for
25479712

.
ath-u.5
for
AT5G52545

.
vvi-u.5
for
100259304

.
osa-u.5
for
4349230

.
zma-u.5
for
100285538

.


Ortholog ID: 10993
Species ath gma osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi cit bdi bdi nta nta
Symbol AT5G52545 LOC100806572 LOC4349230 LOC100285538 LOC103852092 LOC100259304 LOC7493594 LOC25479712 LOC25496421 LOC123168346 LOC123124649 LOC123410828 LOC107904598 LOC107904602 LOC106418154 LOC106419178 LOC110434298 LOC102607794 LOC100821956 LOC100821728 LOC107804327 LOC107807160
Function* RNA-binding protein-like RNA recognition motif protein probable RNA-binding protein 18 uncharacterized LOC4349230 ATP binding protein probable RNA-binding protein 18 uncharacterized LOC100259304 uncharacterized LOC7493594 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 probable RNA-binding protein 18 uncharacterized LOC102607794 probable RNA-binding protein 18 probable RNA-binding protein 18 uncharacterized LOC107804327 uncharacterized LOC107807160
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 4
zma04144 Endocytosis 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 6
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04130 SNARE interactions in vesicular transport 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03015 mRNA surveillance pathway 3
tae04130 SNARE interactions in vesicular transport 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835331 100806572 4349230 100285538 103852092 100259304 7493594 25479712 25496421 123168346 123124649 123410828 107904598 107904602 106418154 106419178 110434298 102607794 100821956 100821728 107804327 107807160
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