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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7494026   gibberellin 20 oxidase 1 
 ppo-u.5   7466751   gibberellin 20 oxidase 1-D 
 ppo-u.5   7482127   gibberellin 20 oxidase 2 
 gma-u.5   GA20OX2   gibberellin 20 oxidase 2 
 gma-u.5   100816834   gibberellin 20 oxidase 2 
 mtr-u.5   25500998   gibberellin 20 oxidase 2 
 mtr-u.5   11415102   gibberellin 20 oxidase 1 
 ath-u.5   GA20OX2   gibberellin 20 oxidase 2 
 ath-u.5   GA20OX3   gibberellin 20-oxidase 3 
 vvi-u.5   100267658   gibberellin 20 oxidase 1-D 
 vvi-u.5   100257500   gibberellin 20 oxidase 1-D-like 
 sly-u.5   20ox-2   gibberellin 20-oxidase-2 
 osa-u.5   4325003   gibberellin 20 oxidase 2-like 
 osa-u.5   4334841   gibberellin 20 oxidase 1-like 
 osa-u.5   9269090   gibberellin 20 oxidase 2 
 zma-u.5   100276935   gibberellin 20-oxidase 3 
 zma-u.5   778427   gibberellin 20 oxidase 1 
 zma-u.5   107521947   gibberellin 20 oxidase 4 

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Top 50 coexpressed genes to 7494026 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494026 (ppo-m.4 coexpression data)

CoexMap"7494026"


ppoLOC7494026 | Entrez gene ID : 7494026    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 2 2 2 1 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00904 [list] [network] Diterpenoid biosynthesis (33 genes)
GO BP
GO:0009686 [list] [network] gibberellin biosynthetic process  (16 genes)  IEA  
GO:0009826 [list] [network] unidimensional cell growth  (20 genes)  IEA  
GO:0009908 [list] [network] flower development  (33 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (143 genes)  IEA  
GO CC
GO MF
GO:0045544 [list] [network] gibberellin 20-oxidase activity  (8 genes)  IEA  
Protein XP_002301315.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  nucl 2,  cyto_plas 2,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_002301315.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_002301315.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7494026

.
ppo-u.5
for
7466751

.
ppo-u.5
for
7482127

.
gma-u.5
for
GA20OX2

.
gma-u.5
for
100816834

.
mtr-u.5
for
25500998

.
mtr-u.5
for
11415102

.
ath-u.5
for
GA20OX2

.
ath-u.5
for
GA20OX3

.
vvi-u.5
for
100267658

.
vvi-u.5
for
100257500

.
sly-u.5
for
20ox-2

.
osa-u.5
for
4325003

.
osa-u.5
for
4334841

.
osa-u.5
for
9269090

.
zma-u.5
for
100276935

.
zma-u.5
for
778427

.
zma-u.5
for
107521947

.


Ortholog ID: 778
Species ath gma sly osa osa zma zma vvi ppo mtr tae hvu hvu ghi ghi bna sbi sbi sot sot cit bdi bdi nta nta
Symbol GA20OX3 GA20OX1 GA20ox1 LOC9269090 LOC4325003 LOC107521947 LOC778427 LOC100232996 LOC7482127 LOC11424005 LOC123093081 LOC123445118 LOC123395214 LOC107890722 LOC107930190 LOC106446088 LOC8063144 LOC8061378 LOC102581792 LOC102598207 LOC102612832 LOC100837430 LOC100823873 LOC107825965 LOC107803183
Function* gibberellin 20-oxidase 3 gibberellin 20 oxidase 1 gibberellin 20-oxidase-1 gibberellin 20 oxidase 2 gibberellin 20 oxidase 2-like gibberellin 20 oxidase 4 gibberellin 20 oxidase 1 gibberellin 20-oxidase gibberellin 20 oxidase 2 gibberellin 20 oxidase 2 gibberellin 20 oxidase 2 gibberellin 20 oxidase 2-like gibberellin 20 oxidase 1-B gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-D gibberellin 20 oxidase 3 gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1-D-like gibberellin 20 oxidase 1-D gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00910 Nitrogen metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly04075 Plant hormone signal transduction 2
sly00904 Diterpenoid biosynthesis 2
sly01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
zma00380 Tryptophan metabolism 4
zma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 4
mtr01230 Biosynthesis of amino acids 3
mtr00904 Diterpenoid biosynthesis 2
mtr00270 Cysteine and methionine metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830611 100777224 543553 9269090 4325003 107521947 778427 100232996 7482127 11424005 123093081 123445118 123395214 107890722 107930190 106446088 8063144 8061378 102581792 102598207 102612832 100837430 100823873 107825965 107803183
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