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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4  7494049  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 gma-u.5  100817126  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 mtr-u.5  11432598  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 ath-u.5  AT3G61170  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100247159  putative pentatricopeptide repeat-containing protein At3g15130 
 sly-u.5  101257316  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 osa-u.5  9270928  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 7494049 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494049 (ppo-m.4 coexpression data)

CoexMap"7494049"


ppoLOC7494049 | Entrez gene ID : 7494049
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002302563.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_002302563.2)
Subcellular
localization
TargetP
mito 5  (predict for XP_002302563.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-m.4
for
7494049

.

gma-u.5
for
100817126

.

mtr-u.5
for
11432598

.

ath-u.5
for
AT3G61170

.

vvi-u.5
for
100247159

.

sly-u.5
for
101257316

.

osa-u.5
for
9270928

.


Ortholog ID: 10837
Species ath gma sly osa bra vvi mtr ghi ghi sot cit cit nta nta
Symbol AT3G61170 LOC100817126 LOC101257316 LOC9270928 LOC103841939 LOC100247159 LOC11432598 LOC107957259 LOC107911957 LOC102586994 LOC102628388 LOC127900991 LOC107790860 LOC107831361
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At3g15130 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825289 100817126 101257316 9270928 103841939 100247159 11432598 107957259 107911957 102586994 102628388 127900991 107790860 107831361
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