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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495977   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ppo-r.4   7495977   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ppo-m.4   7495977   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 ppo-u.5   18096512   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 ppo-u.5   7457995   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 gma-u.5   100788601   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 gma-u.5   FTSH9   ATP-dependent zinc metalloprotease FTSH 8, chloroplastic-like 
 gma-u.5   100798355   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 mtr-u.5   25488224   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 mtr-u.5   25493413   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 ath-u.5   VAR2   FtsH extracellular protease family 
 ath-u.5   FTSH8   FTSH protease 8 
 vvi-u.5   100266289   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic 
 vvi-u.5   100250511   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sly-u.5   101266739   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic 
 sly-u.5   ftsH6   FtsH protease 
 osa-u.5   4340563   ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like 
 osa-u.5   4341796   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like 
 zma-u.5   100147735   filamentation temperature-sensitive H 2B 
 zma-u.5   100147734   uncharacterized LOC100147734 
 zma-u.5   100191560   ftsH6-Zea mays FtsH protease 

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Top 50 coexpressed genes to 7495977 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495977 (ppo-u.5 coexpression data)

CoexMap"7495977"


ppoLOC7495977 | Entrez gene ID : 7495977    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (879 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (147 genes)  IEA  
GO:0016020 [list] [network] membrane  (3780 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (40 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (66 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002324060.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cyto 1,  extr 1,  nucl_plas 1  (predict for XP_002324060.4)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for XP_002324060.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495977

.
ppo-r.4
for
7495977

.
ppo-m.4
for
7495977

.
ppo-u.5
for
18096512

.
ppo-u.5
for
7457995

.
gma-u.5
for
100788601

.
gma-u.5
for
FTSH9

.
gma-u.5
for
100798355

.
mtr-u.5
for
25488224

.
mtr-u.5
for
25493413

.
ath-u.5
for
VAR2

.
ath-u.5
for
FTSH8

.
vvi-u.5
for
100266289

.
vvi-u.5
for
100250511

.
sly-u.5
for
101266739

.
sly-u.5
for
ftsH6

.
osa-u.5
for
4340563

.
osa-u.5
for
4341796

.
zma-u.5
for
100147735

.
zma-u.5
for
100147734

.
zma-u.5
for
100191560

.


Ortholog ID: 2393
Species ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol FTSH8 LOC100800550 LOC101266739 ftsH6 LOC4341796 LOC4340563 LOC100147734 LOC100147735 LOC103867923 LOC103846427 LOC100266289 LOC100250511 LOC7495977 LOC18096512 LOC25488224 LOC123165258 LOC123164751 LOC123407214 LOC121213707 LOC107960354 LOC111213571 CHLRE_17g720050v5 LOC8081292 LOC110430892 LOC102580747 LOC102603811 LOC102613766 LOC102623114 LOC100834087 LOC100832622 LOC107795979 LOC107827004
Function* FTSH protease 8 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic FtsH protease ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like uncharacterized LOC100147734 filamentation temperature-sensitive H 2B ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 8, chloroplastic uncharacterized protein ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00360 Phenylalanine metabolism 3
gma00650 Butanoate metabolism 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00052 Galactose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 15
sly03040 Spliceosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 2
osa00620 Pyruvate metabolism 2
osa01200 Carbon metabolism 2
osa00566 Sulfoquinovose metabolism 2
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00053 Ascorbate and aldarate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra01230 Biosynthesis of amino acids 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00710 Carbon fixation by Calvin cycle 4
bra00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 9
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi03040 Spliceosome 3
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03018 RNA degradation 4
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 16
sot03040 Spliceosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 9
cit03040 Spliceosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00010 Glycolysis / Gluconeogenesis 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837154 100800550 101266739 778337 4341796 4340563 100147734 100147735 103867923 103846427 100266289 100250511 7495977 18096512 25488224 123165258 123164751 123407214 121213707 107960354 111213571 5722667 8081292 110430892 102580747 102603811 102613766 102623114 100834087 100832622 107795979 107827004
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