Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   780656   pre-mRNA-splicing factor 38 
 tae-r.2   123120611   pre-mRNA-splicing factor 38 
 tae-r.2   123103275   pre-mRNA-splicing factor 38 
 hvu-r.1   123399116   pre-mRNA-splicing factor 38 
 bdi-r.1   100844813   pre-mRNA-splicing factor 38 
 osa-u.5   4346374   pre-mRNA-splicing factor 38 
 zma-u.5   100284891   uncharacterized LOC100284891 
 sbi-r.1   8062587   pre-mRNA-splicing factor 38 
 ath-u.5   AT2G40650   PRP38 family protein 
 gma-u.5   100794094   pre-mRNA-splicing factor 38 
 gma-u.5   100792466   pre-mRNA-splicing factor 38A-like 
 sly-u.5   101263250   pre-mRNA-splicing factor 38 
 bra-r.6   103865826   pre-mRNA-splicing factor 38 
 bra-r.6   103857945   pre-mRNA-splicing factor 38 
 vvi-u.5   100266508   pre-mRNA-splicing factor 38 
 ppo-u.5   18104015   pre-mRNA-splicing factor 38 
 mtr-u.5   11407187   pre-mRNA-splicing factor 38 
 ghi-r.1   107914482   pre-mRNA-splicing factor 38 
 ghi-r.1   107896863   pre-mRNA-splicing factor 38 
 bna-r.1   106438018   pre-mRNA-splicing factor 38 
 bna-r.1   106388170   pre-mRNA-splicing factor 38 
 bna-r.1   106391613   pre-mRNA-splicing factor 38 
 sot-r.1   102590973   pre-mRNA-splicing factor 38 
 cit-r.1   102608987   pre-mRNA-splicing factor 38 
 nta-r.1   107815306   pre-mRNA-splicing factor 38-like 
 nta-r.1   107772253   uncharacterized LOC107772253 
 nta-r.1   107791862   pre-mRNA-splicing factor 38 
 cre-r.1   CHLRE_12g503400v5   uncharacterized protein 

close


Top 50 coexpressed genes to 780656 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 780656 (tae-r.2 coexpression data)

CoexMap"780656"


taeLOC780656 | Entrez gene ID : 780656    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 2 1 1 1 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO CC
GO MF
Protein XP_044388202.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 2,  mito 1,  pero 1,  cysk 1  (predict for XP_044388202.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_044388202.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
780656
tae-r.2
for
123120611
tae-r.2
for
123103275
hvu-r.1
for
123399116
bdi-r.1
for
100844813
osa-u.5
for
4346374
zma-u.5
for
100284891
sbi-r.1
for
8062587
ath-u.5
for
AT2G40650
gma-u.5
for
100794094
gma-u.5
for
100792466
sly-u.5
for
101263250
bra-r.6
for
103865826
bra-r.6
for
103857945
vvi-u.5
for
100266508
ppo-u.5
for
18104015
mtr-u.5
for
11407187
ghi-r.1
for
107914482
ghi-r.1
for
107896863
bna-r.1
for
106438018
bna-r.1
for
106388170
bna-r.1
for
106391613
sot-r.1
for
102590973
cit-r.1
for
102608987
nta-r.1
for
107815306
nta-r.1
for
107772253
nta-r.1
for
107791862
cre-r.1
for
CHLRE_12g503400v5


Ortholog ID: 7959
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC780656 LOC123120611 LOC123103275 LOC123399116 LOC100844813 LOC4346374 LOC100284891 LOC8062587 AT2G40650 LOC100794094 LOC100792466 LOC101263250 LOC103865826 LOC103857945 LOC100266508 LOC18104015 LOC11407187 LOC107914482 LOC107896863 LOC106438018 LOC106391613 LOC106447515 LOC102590973 LOC102608987 LOC107815306 LOC107772253 LOC107791862 CHLRE_12g503400v5
Function* pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 uncharacterized LOC100284891 pre-mRNA-splicing factor 38 PRP38 family protein pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38A-like pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38-like pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38-like uncharacterized LOC107772253 pre-mRNA-splicing factor 38 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03040 Spliceosome 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 780656 123120611 123103275 123399116 100844813 4346374 100284891 8062587 818660 100794094 100792466 101263250 103865826 103857945 100266508 18104015 11407187 107914482 107896863 106438018 106391613 106447515 102590973 102608987 107815306 107772253 107791862 5716427
The preparation time of this page was 2.2 [sec].