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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062587   pre-mRNA-splicing factor 38 
 zma-u.5   100284891   uncharacterized LOC100284891 
 osa-u.5   4346374   pre-mRNA-splicing factor 38 
 ath-u.5   AT2G40650   PRP38 family protein 
 gma-u.5   100794094   pre-mRNA-splicing factor 38 
 gma-u.5   100792466   pre-mRNA-splicing factor 38A-like 
 sly-u.5   101263250   pre-mRNA-splicing factor 38 
 vvi-u.5   100266508   pre-mRNA-splicing factor 38 
 ppo-u.5   18104015   pre-mRNA-splicing factor 38 
 mtr-u.5   11407187   pre-mRNA-splicing factor 38 

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Top 50 coexpressed genes to 8062587 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062587 (sbi-r.1 coexpression data)

CoexMap"8062587"


sbiLOC8062587 | Entrez gene ID : 8062587    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (39 genes)  IEA  
GO MF
Protein XP_002462026.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_002462026.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002462026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062587

.
zma-u.5
for
100284891

.
osa-u.5
for
4346374

.
ath-u.5
for
AT2G40650

.
gma-u.5
for
100794094

.
gma-u.5
for
100792466

.
sly-u.5
for
101263250

.
vvi-u.5
for
100266508

.
ppo-u.5
for
18104015

.
mtr-u.5
for
11407187

.


Ortholog ID: 7959
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G40650 LOC100792466 LOC100794094 LOC101263250 LOC4346374 LOC100284891 LOC103857945 LOC103865826 LOC100266508 LOC18104015 LOC11407187 LOC123103275 LOC780656 LOC123399116 LOC107896863 LOC107914482 LOC106391613 LOC106438018 CHLRE_12g503400v5 LOC8062587 LOC102590973 LOC102608987 LOC100844813 LOC107772253 LOC107815306
Function* PRP38 family protein pre-mRNA-splicing factor 38A-like pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 uncharacterized LOC100284891 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 uncharacterized protein pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 pre-mRNA-splicing factor 38 uncharacterized LOC107772253 pre-mRNA-splicing factor 38-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03040 Spliceosome 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818660 100792466 100794094 101263250 4346374 100284891 103857945 103865826 100266508 18104015 11407187 123103275 780656 123399116 107896863 107914482 106391613 106438018 5716427 8062587 102590973 102608987 100844813 107772253 107815306
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