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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   psbA   photosystem II protein D1 
 sly-u.5   psbA   photosystem II protein D1 
 ath-u.5   psbA   photosystem II protein D1 
 gma-u.5   psbA   photosystem II protein D1 
 vvi-u.5   psbA   PSII 32 kDa protein 
 ppo-u.5   psbA   photosystem II protein D1 
 mtr-u.5   psbA   photosystem II protein D1 
 mtr-u.5   120580929   photosystem II protein D1 
 mtr-u.5   120580075   photosystem II protein D1 
 osa-u.5   psbA   photosystem II protein D1 
 zma-u.5   118473630   photosystem II protein D1 
 zma-u.5   118475436   photosystem II protein D1 

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Top 50 coexpressed genes to psbA (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to psbA (nta-r.1 coexpression data)

CoexMap"800514"


ntapsbA | Entrez gene ID : 800514    
Species nta sly ath gma vvi ppo mtr osa zma sbi bra cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 3 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00195 [list] [network] Photosynthesis (136 genes)
GO BP
GO CC
GO MF
Protein NP_054477.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto_plas 4,  golg 2,  E.R. 1  (predict for NP_054477.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_054477.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
psbA

.
sly-u.5
for
psbA

.
ath-u.5
for
psbA

.
gma-u.5
for
psbA

.
vvi-u.5
for
psbA

.
ppo-u.5
for
psbA

.
mtr-u.5
for
psbA

.
mtr-u.5
for
120580929

.
mtr-u.5
for
120580075

.
osa-u.5
for
psbA

.
zma-u.5
for
118473630

.
zma-u.5
for
118475436

.


Ortholog ID: 964
Species ath gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol psbA psbA psbA psbA psbA LOC118475933 LOC117129783 LOC117126229 psbA psbA LOC120580929 LOC120577103 LOC123181322 LOC123176984 LOC123422976 LOC123418890 LOC121227929 psbA LOC125604865 LOC125602599 psbA psbA psbA psbA psbA
Function* photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1 photosystem II protein D1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 14
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 12
osa00190 Oxidative phosphorylation 6
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 6
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 6
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi03010 Ribosome 5
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 13
ppo00190 Oxidative phosphorylation 5
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 20
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 7
sbi03010 Ribosome 7
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot03010 Ribosome 5
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 12
cit00190 Oxidative phosphorylation 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
bdi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 16
nta00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844802 3989259 3950408 3131409 845199 118475933 117129783 117126229 4025118 4929629 120580929 120577103 123181322 123176984 123422976 123418890 121227929 3989229 125604865 125602599 4549136 4099946 4271240 6439798 800514
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