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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8054115   glycine cleavage system H protein, mitochondrial 
 zma-u.5   100273340   Glycine cleavage system H protein 2 mitochondrial 
 zma-u.5   103638939   glycine cleavage system H protein 2, mitochondrial 
 zma-u.5   541947   glycine cleavage system H protein, mitochondrial 
 osa-u.5   4341790   glycine cleavage system H protein 2, mitochondrial 
 osa-u.5   4328441   glycine cleavage system H protein 2, mitochondrial 
 osa-u.5   4349114   glycine cleavage system H protein, mitochondrial 
 ath-u.5   AT2G35120   Single hybrid motif superfamily protein 
 ath-u.5   GDCH   glycine decarboxylase complex H 
 ath-u.5   AT1G32470   Single hybrid motif superfamily protein 
 gma-u.5   100792708   glycine cleavage system H protein, mitochondrial-like 
 gma-u.5   100306654   uncharacterized LOC100306654 
 gma-u.5   100796561   glycine cleavage system H protein 2, mitochondrial 
 sly-u.5   101244882   glycine cleavage system H protein, mitochondrial 
 sly-u.5   ADH11A4a   glycine cleavage system H protein, mitochondrial 
 sly-u.5   101258615   glycine cleavage system H protein 2, mitochondrial 
 vvi-u.5   100265691   glycine cleavage system H protein 2, mitochondrial 
 vvi-u.5   100259229   glycine cleavage system H protein, mitochondrial 
 vvi-u.5   100252595   glycine cleavage system H protein 2, mitochondrial 
 ppo-u.5   7481801   glycine cleavage system H protein 2, mitochondrial 
 ppo-u.5   18096946   glycine cleavage system H protein 3, mitochondrial 
 ppo-u.5   7453995   glycine cleavage system H protein 2, mitochondrial 
 mtr-u.5   11433975   glycine cleavage system H protein, mitochondrial 
 mtr-u.5   11443425   glycine cleavage system H protein 2, mitochondrial 

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Top 50 coexpressed genes to 8054115 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8054115 (sbi-r.1 coexpression data)

CoexMap"8054115"


sbiLOC8054115 | Entrez gene ID : 8054115      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
sbi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (73 genes)
sbi00670 [list] [network] One carbon pool by folate (32 genes)
sbi00785 [list] [network] Lipoic acid metabolism (30 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
GO BP
GO:0009249 [list] [network] protein lipoylation  (4 genes)  IEA  
GO:0019464 [list] [network] glycine decarboxylation via glycine cleavage system  (4 genes)  IEA  
GO CC
GO:0005960 [list] [network] glycine cleavage complex  (3 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
Protein XP_002441938.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_002441938.1)
Subcellular
localization
TargetP
scret 4,  mito 4  (predict for XP_002441938.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8054115

.
zma-u.5
for
100273340

.
zma-u.5
for
103638939

.
zma-u.5
for
541947

.
osa-u.5
for
4341790

.
osa-u.5
for
4328441

.
osa-u.5
for
4349114

.
ath-u.5
for
AT2G35120

.
ath-u.5
for
GDCH

.
ath-u.5
for
AT1G32470

.
gma-u.5
for
100792708

.
gma-u.5
for
100306654

.
gma-u.5
for
100796561

.
sly-u.5
for
101244882

.
sly-u.5
for
ADH11A4a

.
sly-u.5
for
101258615

.
vvi-u.5
for
100265691

.
vvi-u.5
for
100259229

.
vvi-u.5
for
100252595

.
ppo-u.5
for
7481801

.
ppo-u.5
for
18096946

.
ppo-u.5
for
7453995

.
mtr-u.5
for
11433975

.
mtr-u.5
for
11443425

.


Ortholog ID: 1376
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G35120 GDCH LOC100792708 LOC100796561 LOC101258615 LOC101244882 LOC4341790 LOC4349114 LOC100286311 LOC103638939 LOC103833647 LOC103857558 LOC100259229 LOC100252595 LOC7453995 LOC18096946 LOC11443425 LOC11433975 LOC123145544 LOC543355 LOC123401106 LOC123403997 LOC107912193 LOC107945219 LOC125600518 LOC106418951 CHLRE_06g253350v5 LOC8054115 LOC8077176 LOC102590851 LOC102598788 LOC102611254 LOC102614363 LOC100824105 LOC100828497 LOC107805221 LOC107772739
Function* Single hybrid motif superfamily protein glycine decarboxylase complex H glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 1 glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 3, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 3, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 3, mitochondrial-like glycine cleavage system H protein 3, mitochondrial-like uncharacterized protein glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 11
ath00710 Carbon fixation by Calvin cycle 9
ath00195 Photosynthesis 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 7
gma01200 Carbon metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03060 Protein export 3
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly01230 Biosynthesis of amino acids 5
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00670 One carbon pool by folate 4
zma00785 Lipoic acid metabolism 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00670 One carbon pool by folate 4
zma00785 Lipoic acid metabolism 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00260 Glycine, serine and threonine metabolism 5
bra01230 Biosynthesis of amino acids 4
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00710 Carbon fixation by Calvin cycle 4
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00670 One carbon pool by folate 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo00270 Cysteine and methionine metabolism 6
ppo00670 One carbon pool by folate 6
ppo01240 Biosynthesis of cofactors 5
ppo00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo01200 Carbon metabolism 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 8
mtr00710 Carbon fixation by Calvin cycle 6
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00030 Pentose phosphate pathway 4
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 5
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 5
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00710 Carbon fixation by Calvin cycle 6
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00195 Photosynthesis 4
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi00785 Lipoic acid metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 10
bna00630 Glyoxylate and dicarboxylate metabolism 10
bna00670 One carbon pool by folate 10
bna00785 Lipoic acid metabolism 10
bna01200 Carbon metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 9
bna00630 Glyoxylate and dicarboxylate metabolism 9
bna00670 One carbon pool by folate 9
bna00785 Lipoic acid metabolism 9
bna01200 Carbon metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04144 Endocytosis 3
cre04145 Phagosome 2
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00670 One carbon pool by folate 4
sbi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 11
sot01230 Biosynthesis of amino acids 7
sot00710 Carbon fixation by Calvin cycle 6
sot00010 Glycolysis / Gluconeogenesis 5
sot00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00940 Phenylpropanoid biosynthesis 2
cit00190 Oxidative phosphorylation 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00195 Photosynthesis 2
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818078 818104 100792708 100796561 101258615 101244882 4341790 4349114 100286311 103638939 103833647 103857558 100259229 100252595 7453995 18096946 11443425 11433975 123145544 543355 123401106 123403997 107912193 107945219 125600518 106418951 5722154 8054115 8077176 102590851 102598788 102611254 102614363 100824105 100828497 107805221 107772739
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