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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8054359   small GTPase LIP1 
 sbi-r.1   8083593   small GTPase LIP1 
 zma-u.5   100194186   uncharacterized LOC100194186 
 zma-u.5   100284549   RAB, member of RAS oncogene family-like 3 
 osa-u.5   4332217   small GTPase LIP1 
 osa-u.5   4348056   small GTPase LIP1 
 tae-r.2   123047581   small GTPase LIP1 
 tae-r.2   123085198   small GTPase LIP1 
 tae-r.2   123125427   small GTPase LIP1 
 hvu-r.1   123433225   small GTPase LIP1-like 
 hvu-r.1   123449182   small GTPase LIP1-like 
 bdi-r.1   100843178   small GTPase LIP1 
 bdi-r.1   100845228   small GTPase LIP1 
 ath-u.5   LIP1   Ras-related small GTP-binding family protein 
 gma-u.5   100784826   small GTPase LIP1 
 gma-u.5   100808270   small GTPase LIP1 
 sly-u.5   101258060   small GTPase LIP1 
 bra-r.6   103873908   small GTPase LIP1 
 bra-r.6   103837556   small GTPase LIP1 
 vvi-u.5   100247674   small GTPase LIP1 
 vvi-u.5   100244132   small GTPase LIP1 
 ppo-u.5   7456266   small GTPase LIP1 
 ppo-u.5   7477132   small GTPase LIP1 
 mtr-u.5   11427447   small GTPase LIP1 
 ghi-r.1   107948876   small GTPase LIP1 
 ghi-r.1   107948408   small GTPase LIP1 
 ghi-r.1   107911655   small GTPase LIP1 
 bna-r.1   BNAC09G06710D   small GTPase LIP1 
 bna-r.1   106375599   small GTPase LIP1 
 bna-r.1   106348022   small GTPase LIP1 
 sot-r.1   102595110   uncharacterized GTP-binding protein At5g64813 
 cit-r.1   102621135   small GTPase LIP1 
 nta-r.1   142167891   small GTPase LIP1-like 
 nta-r.1   142167889   small GTPase LIP1-like 
 nta-r.1   142161746   small GTPase LIP1-like 

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Top 50 coexpressed genes to 8054359 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8054359 (sbi-r.1 coexpression data)

CoexMap"8054359"


sbiLOC8054359 | Entrez gene ID : 8054359      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 2 3 2 2 1 2 1 2 2 2 1 3 3 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006886 [list] [network] intracellular protein transport  (256 genes)  IEA  
GO CC
GO:0012505 [list] [network] endomembrane system  (1143 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (185 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (211 genes)  IEA  
Protein XP_002468188.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  nucl_plas 1,  cyto 1  (predict for XP_002468188.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_002468188.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8054359
sbi-r.1
for
8083593
zma-u.5
for
100194186
zma-u.5
for
100284549
osa-u.5
for
4332217
osa-u.5
for
4348056
tae-r.2
for
123047581
tae-r.2
for
123085198
tae-r.2
for
123125427
hvu-r.1
for
123433225
hvu-r.1
for
123449182
bdi-r.1
for
100843178
bdi-r.1
for
100845228
ath-u.5
for
LIP1
gma-u.5
for
100784826
gma-u.5
for
100808270
sly-u.5
for
101258060
bra-r.6
for
103873908
bra-r.6
for
103837556
vvi-u.5
for
100247674
vvi-u.5
for
100244132
ppo-u.5
for
7456266
ppo-u.5
for
7477132
mtr-u.5
for
11427447
ghi-r.1
for
107948876
ghi-r.1
for
107948408
ghi-r.1
for
107911655
bna-r.1
for
BNAC09G06710D
bna-r.1
for
106375599
bna-r.1
for
106348022
sot-r.1
for
102595110
cit-r.1
for
102621135
nta-r.1
for
142167891
nta-r.1
for
142167889
nta-r.1
for
142161746


Ortholog ID: 4781
Species sbi sbi zma zma osa osa tae tae tae hvu hvu bdi bdi ath gma gma sly bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta
Symbol LOC8054359 LOC8083593 LOC100194186 LOC100284549 LOC4332217 LOC4348056 LOC123047581 LOC123085198 LOC123181213 LOC123433225 LOC123449182 LOC100843178 LOC100845228 LIP1 LOC100784826 LOC100808270 LOC101258060 LOC103873908 LOC103837556 LOC100247674 LOC100244132 LOC7456266 LOC7477132 LOC11427447 LOC107948876 LOC107948408 LOC107899577 BNAC09G06710D LOC106375599 LOC125593354 LOC102595110 LOC102621135 LOC142167889 LOC142161746 LOC107827248
Function* small GTPase LIP1 small GTPase LIP1 uncharacterized LOC100194186 RAB, member of RAS oncogene family-like 3 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1-like small GTPase LIP1-like small GTPase LIP1 small GTPase LIP1 Ras-related small GTP-binding family protein small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1-like uncharacterized GTP-binding protein At5g64813 small GTPase LIP1 small GTPase LIP1-like small GTPase LIP1-like small GTPase LIP1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 9
tae04145 Phagosome 9
tae04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00190 Oxidative phosphorylation 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu04144 Endocytosis 3
hvu03060 Protein export 2
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 5
vvi00541 Biosynthesis of various nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03015 mRNA surveillance pathway 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03050 Proteasome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 4
sot00053 Ascorbate and aldarate metabolism 3
sot01240 Biosynthesis of cofactors 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8054359 8083593 100194186 100284549 4332217 4348056 123047581 123085198 123181213 123433225 123449182 100843178 100845228 836603 100784826 100808270 101258060 103873908 103837556 100247674 100244132 7456266 7477132 11427447 107948876 107948408 107899577 106416239 106375599 125593354 102595110 102621135 142167889 142161746 107827248
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