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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055871   OTU domain-containing protein At3g57810 
 zma-u.5   100284472   uncharacterized LOC100284472 
 zma-u.5   100275661   uncharacterized LOC100275661 
 zma-u.5   100193463   uncharacterized LOC100193463 
 osa-u.5   4347429   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 osa-u.5   4345979   uncharacterized LOC4345979 
 osa-u.5   4325039   uncharacterized LOC4325039 
 ath-u.5   AT3G57810   Cysteine proteinases superfamily protein 
 gma-u.5   100792132   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 gma-u.5   100793001   uncharacterized LOC100793001 
 gma-u.5   100796040   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 sly-u.5   101253339   uncharacterized LOC101253339 
 vvi-u.5   100245448   uncharacterized LOC100245448 
 vvi-u.5   100251219   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 vvi-u.5   100853500   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 ppo-u.5   7468472   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 ppo-u.5   7483998   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 ppo-u.5   7479833   uncharacterized LOC7479833 
 mtr-u.5   25483392   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 mtr-u.5   11429086   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 

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Top 50 coexpressed genes to 8055871 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055871 (sbi-r.1 coexpression data)

CoexMap"8055871"


sbiLOC8055871 | Entrez gene ID : 8055871    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 1 3 1 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030968 [list] [network] endoplasmic reticulum unfolded protein response  (19 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (78 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (64 genes)  IEA  
Protein XP_002460450.2 [sequence] [blastp]
XP_021307906.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002460450.2)
chlo 9,  nucl 1,  mito 1  (predict for XP_021307906.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_002460450.2)
mito 3  (predict for XP_021307906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055871

.
zma-u.5
for
100284472

.
zma-u.5
for
100275661

.
zma-u.5
for
100193463

.
osa-u.5
for
4347429

.
osa-u.5
for
4345979

.
osa-u.5
for
4325039

.
ath-u.5
for
AT3G57810

.
gma-u.5
for
100792132

.
gma-u.5
for
100793001

.
gma-u.5
for
100796040

.
sly-u.5
for
101253339

.
vvi-u.5
for
100245448

.
vvi-u.5
for
100251219

.
vvi-u.5
for
100853500

.
ppo-u.5
for
7468472

.
ppo-u.5
for
7483998

.
ppo-u.5
for
7479833

.
mtr-u.5
for
25483392

.
mtr-u.5
for
11429086

.


Ortholog ID: 2282
Species ath gma gma sly osa osa zma zma bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi nta nta
Symbol AT3G57810 LOC100792132 LOC100810338 LOC101253339 LOC4347429 LOC4345979 LOC100284472 LOC100193463 LOC103841684 LOC100251219 LOC100245448 LOC7479833 LOC25483392 LOC123121920 LOC123113744 LOC123445037 LOC123452776 LOC107896321 LOC121219873 LOC111200346 LOC106376867 CHLRE_01g047450v5 LOC8055871 LOC8055183 LOC102606023 LOC102607992 LOC102623357 LOC100846939 LOC107831574 LOC107820843
Function* Cysteine proteinases superfamily protein OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OTU domain-containing protein At3g57810-like uncharacterized LOC101253339 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC4345979 uncharacterized LOC100284472 uncharacterized LOC100193463 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC100245448 uncharacterized LOC7479833 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized protein OTU domain-containing protein At3g57810 OTU domain-containing protein At3g57810 uncharacterized LOC102606023 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OTU domain-containing protein At3g57810 uncharacterized LOC107831574 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 6
osa01230 Biosynthesis of amino acids 5
osa00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa03040 Spliceosome 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03040 Spliceosome 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna00970 Aminoacyl-tRNA biosynthesis 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 3
nta00561 Glycerolipid metabolism 3
nta00600 Sphingolipid metabolism 3
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824950 100792132 100810338 101253339 4347429 4345979 100284472 100193463 103841684 100251219 100245448 7479833 25483392 123121920 123113744 123445037 123452776 107896321 121219873 111200346 106376867 5715684 8055871 8055183 102606023 102607992 102623357 100846939 107831574 107820843
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