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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056354   scarecrow-like protein 23 
 zma-u.5   542138   scarecrow-like protein 23 
 osa-u.5   4343637   scarecrow-like protein 23 
 ath-u.5   AT5G41920   GRAS family transcription factor 
 gma-u.5   100816249   scarecrow-like protein 23 
 gma-u.5   100815217   scarecrow-like protein 23 
 sly-u.5   101256307   scarecrow-like protein 23 
 vvi-u.5   100854772   scarecrow-like protein 23 
 ppo-u.5   7495639   scarecrow-like protein 23 
 ppo-u.5   7453725   scarecrow-like protein 23 
 mtr-u.5   11442833   scarecrow-like protein 23 

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Top 50 coexpressed genes to 8056354 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056354 (sbi-r.1 coexpression data)

CoexMap"8056354"


sbiLOC8056354 | Entrez gene ID : 8056354    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090610 [list] [network] bundle sheath cell fate specification  (3 genes)  IEA  
GO:0048366 [list] [network] leaf development  (18 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (711 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1111 genes)  IEA  
Protein XP_002460873.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 4  (predict for XP_002460873.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002460873.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056354

.
zma-u.5
for
542138

.
osa-u.5
for
4343637

.
ath-u.5
for
AT5G41920

.
gma-u.5
for
100816249

.
gma-u.5
for
100815217

.
sly-u.5
for
101256307

.
vvi-u.5
for
100854772

.
ppo-u.5
for
7495639

.
ppo-u.5
for
7453725

.
mtr-u.5
for
11442833

.


Ortholog ID: 9712
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G41920 LOC100815217 LOC100816249 LOC101256307 LOC4343637 LOC542138 LOC103864129 LOC100854772 LOC7453725 LOC7495639 LOC11442833 LOC123052377 LOC123044515 LOC123425660 LOC107950277 LOC107915480 LOC125607961 LOC106373514 LOC8056354 LOC102600621 LOC102622768 LOC100829345 LOC107802934 LOC107759968
Function* GRAS family transcription factor scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23 scarecrow-like protein 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00071 Fatty acid degradation 2
vvi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834197 100815217 100816249 101256307 4343637 542138 103864129 100854772 7453725 7495639 11442833 123052377 123044515 123425660 107950277 107915480 125607961 106373514 8056354 102600621 102622768 100829345 107802934 107759968
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