Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056409   transcription factor PIF5 
 zma-u.5   100193167   uncharacterized LOC100193167 
 zma-u.5   100216625   uncharacterized LOC100216625 
 osa-u.5   9269153   transcription factor SPATULA 
 osa-u.5   4340229   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like 
 ath-u.5   SPT   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   102668194   transcription factor ALC 
 gma-u.5   100806962   transcription factor SPATULA 
 gma-u.5   100797351   transcription factor SPATULA 
 sly-u.5   ALC   transcription factor ALC 
 sly-u.5   SPT   transcription factor SPATULA 
 vvi-u.5   100245419   transcription factor SPATULA 
 vvi-u.5   100245665   transcription factor SPATULA 
 ppo-u.5   7462871   transcription factor SPATULA 
 ppo-u.5   18104866   transcription factor SPATULA 
 mtr-u.5   11415523   transcription factor SPATULA 
 mtr-u.5   11414235   transcription factor ALC 

close


Top 50 coexpressed genes to 8056409 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8056409 (sbi-r.1 coexpression data)

CoexMap"8056409"


sbiLOC8056409 | Entrez gene ID : 8056409    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04075 [list] [network] Plant hormone signal transduction (389 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (479 genes)  IEA  
Protein XP_002454736.2 [sequence] [blastp]
XP_021315410.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002454736.2)
nucl 9  (predict for XP_021315410.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_002454736.2)
other 6,  chlo 3  (predict for XP_021315410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056409

.
zma-u.5
for
100193167

.
zma-u.5
for
100216625

.
osa-u.5
for
9269153

.
osa-u.5
for
4340229

.
ath-u.5
for
SPT

.
gma-u.5
for
102668194

.
gma-u.5
for
100806962

.
gma-u.5
for
100797351

.
sly-u.5
for
ALC

.
sly-u.5
for
SPT

.
vvi-u.5
for
100245419

.
vvi-u.5
for
100245665

.
ppo-u.5
for
7462871

.
ppo-u.5
for
18104866

.
mtr-u.5
for
11415523

.
mtr-u.5
for
11414235

.


Ortholog ID: 2576
Species ath gma gma sly osa osa zma zma vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna sbi sot sot cit cit nta nta
Symbol SPT LOC100806962 LOC100793754 SPT LOC4340229 LOC9269153 LOC100216625 LOC100193167 LOC100245665 LOC100245419 LOC18104866 LOC11414235 LOC123146019 LOC123128873 LOC123406162 LOC123407232 LOC107913239 LOC107905585 LOC106390344 LOC8056409 LOC102591818 LOC102578586 LOC102629932 LOC102617525 LOC107787554 LOC107807290
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like transcription factor SPATULA uncharacterized LOC100216625 uncharacterized LOC100193167 transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor ALC transcription factor SPATULA transcription factor PIF1 transcription factor APG-like transcription factor PIF3-like transcription factor ALC transcription factor SPATULA transcription factor ALC transcription factor PIF5 transcription factor SPATULA-like transcription factor SPATULA transcription factor ALC-like transcription factor SPATULA uncharacterized LOC107787554 uncharacterized LOC107807290
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00220 Arginine biosynthesis 2
ath00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma04626 Plant-pathogen interaction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 4
sly01200 Carbon metabolism 4
sly01210 2-Oxocarboxylic acid metabolism 3
sly00760 Nicotinate and nicotinamide metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa01240 Biosynthesis of cofactors 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04075 Plant hormone signal transduction 3
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi00051 Fructose and mannose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 5
sot01200 Carbon metabolism 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 3
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot01240 Biosynthesis of cofactors 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01212 Fatty acid metabolism 3
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta04075 Plant hormone signal transduction 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829847 100806962 100793754 101266791 4340229 9269153 100216625 100193167 100245665 100245419 18104866 11414235 123146019 123128873 123406162 123407232 107913239 107905585 106390344 8056409 102591818 102578586 102629932 102617525 107787554 107807290
The preparation time of this page was 0.1 [sec].