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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058156   la-related protein 6B 
 sbi-r.1   8076903   la-related protein 6B 
 sbi-r.1   8060902   la-related protein 6B 
 sbi-r.1   8079405   la-related protein 6A 
 zma-u.5   103636640   uncharacterized LOC103636640 
 zma-u.5   100282075   uncharacterized LOC100282075 
 zma-u.5   100217316   uncharacterized LOC100217316 
 osa-u.5   4325141   la-related protein 6A 
 osa-u.5   9269121   la-related protein 6B 
 osa-u.5   4346201   la-related protein 6B 
 tae-r.2   123111075   la-related protein 6B 
 tae-r.2   123086775   la-related protein 6B 
 tae-r.2   123091204   la-related protein 6B 
 hvu-r.1   123408889   la-related protein 6B-like 
 hvu-r.1   123451771   la-related protein 6B-like 
 hvu-r.1   123444440   la-related protein 6A-like 
 bdi-r.1   100842995   la-related protein 6B 
 bdi-r.1   100831659   la-related protein 6B 
 bdi-r.1   100829244   la-related protein 6B 
 ath-u.5   LARP6b   RNA-binding protein 
 ath-u.5   LARP6a   RNA-binding protein 
 gma-u.5   100801679   la-related protein 6B 
 gma-u.5   100788145   la-related protein 6A 
 gma-u.5   100813426   la-related protein 6B 
 sly-u.5   101263189   la-related protein 6B 
 sly-u.5   101245912   la-related protein 6A 
 sly-u.5   101250385   la-related protein 6B-like 
 bra-r.6   103827742   la-related protein 6A 
 bra-r.6   103866758   la-related protein 6B 
 bra-r.6   103839619   la-related protein 6A 
 vvi-u.5   100259405   la-related protein 6B 
 vvi-u.5   100250312   la-related protein 6A 
 ppo-u.5   7483585   la-related protein 6A 
 ppo-u.5   7472516   la-related protein 6B 
 ppo-u.5   7465612   la-related protein 6B 
 mtr-u.5   11441312   la-related protein 6A 
 mtr-u.5   25499761   la-related protein 6B 
 ghi-r.1   107960259   la-related protein 6A 
 ghi-r.1   107938957   la-related protein 6B 
 ghi-r.1   107939683   la-related protein 6B 
 bna-r.1   125575018   la-related protein 6A-like 
 bna-r.1   106411046   la-related protein 6A 
 bna-r.1   106367631   la-related protein 6A 
 sot-r.1   102593695   la-related protein 6B-like 
 sot-r.1   102587503   la-related protein 6B 
 sot-r.1   102582212   la-related protein 6A 
 cit-r.1   102617721   la-related protein 6A 
 cit-r.1   102615388   la-related protein 6B 
 nta-r.1   107760745   la-related protein 6B-like 
 nta-r.1   107762826   la-related protein 6B 
 nta-r.1   107780684   la-related protein 6B 
 cre-r.1   CHLRE_02g106250v5   uncharacterized protein 

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Top 50 coexpressed genes to 8058156 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058156 (sbi-r.1 coexpression data)

CoexMap"8058156"


sbiLOC8058156 | Entrez gene ID : 8058156      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 3 3 3 2 3 3 3 2 3 2 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (599 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002443059.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  plas 1,  E.R._vacu 1  (predict for XP_002443059.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_002443059.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058156
sbi-r.1
for
8076903
sbi-r.1
for
8060902
sbi-r.1
for
8079405
zma-u.5
for
103636640
zma-u.5
for
100282075
zma-u.5
for
100217316
osa-u.5
for
4325141
osa-u.5
for
9269121
osa-u.5
for
4346201
tae-r.2
for
123111075
tae-r.2
for
123086775
tae-r.2
for
123091204
hvu-r.1
for
123408889
hvu-r.1
for
123451771
hvu-r.1
for
123444440
bdi-r.1
for
100842995
bdi-r.1
for
100831659
bdi-r.1
for
100829244
ath-u.5
for
LARP6b
ath-u.5
for
LARP6a
gma-u.5
for
100801679
gma-u.5
for
100788145
gma-u.5
for
100813426
sly-u.5
for
101263189
sly-u.5
for
101245912
sly-u.5
for
101250385
bra-r.6
for
103827742
bra-r.6
for
103866758
bra-r.6
for
103839619
vvi-u.5
for
100259405
vvi-u.5
for
100250312
ppo-u.5
for
7483585
ppo-u.5
for
7472516
ppo-u.5
for
7465612
mtr-u.5
for
11441312
mtr-u.5
for
25499761
ghi-r.1
for
107960259
ghi-r.1
for
107938957
ghi-r.1
for
107939683
bna-r.1
for
125575018
bna-r.1
for
106411046
bna-r.1
for
106367631
sot-r.1
for
102593695
sot-r.1
for
102587503
sot-r.1
for
102582212
cit-r.1
for
102617721
cit-r.1
for
102615388
nta-r.1
for
107760745
nta-r.1
for
107762826
nta-r.1
for
107780684
cre-r.1
for
CHLRE_02g106250v5


Ortholog ID: 1418
Species sbi sbi sbi zma zma zma osa osa osa tae tae tae hvu hvu hvu bdi bdi bdi ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC8058156 LOC8076903 LOC8079405 LOC103636640 LOC100216671 LOC103643076 LOC4325141 LOC9269121 LOC4346201 LOC123091204 LOC123079210 LOC123152133 LOC123451771 LOC123444440 LOC123447826 LOC100831659 LOC100829244 LOC104582867 LARP6b LARP6a LOC100801679 LOC100788145 LOC100813426 LOC101263189 LOC101250385 LOC101259271 LOC103827742 LOC103866758 LOC103839619 LOC100259405 LOC100250312 LOC7483585 LOC7472516 LOC7465612 LOC11441312 LOC25499761 LOC107938957 LOC107939683 LOC121230866 LOC125575018 LOC106411046 LOC106397029 LOC102593695 LOC102587503 LOC102617721 LOC102615388 LOC107780684 LOC107817540 LOC107780928 CHLRE_02g106250v5
Function* la-related protein 6B la-related protein 6B la-related protein 6A uncharacterized LOC103636640 La-related protein 6A la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6B la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6B-like la-related protein 6A-like la-related protein 6B la-related protein 6B la-related protein 6B la-related protein 6A RNA-binding protein RNA-binding protein la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6B la-related protein 6B-like la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6A la-related protein 6A la-related protein 6B la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6B la-related protein 6B la-related protein 6A la-related protein 6A-like la-related protein 6A la-related protein 6A la-related protein 6B-like la-related protein 6B la-related protein 6A la-related protein 6B la-related protein 6B la-related protein 6B-like la-related protein 6A-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa04120 Ubiquitin mediated proteolysis 3
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00543 Exopolysaccharide biosynthesis 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00220 Arginine biosynthesis 2
tae00240 Pyrimidine metabolism 2
tae00250 Alanine, aspartate and glutamate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03083 Polycomb repressive complex 2
hvu04130 SNARE interactions in vesicular transport 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 3
bra04141 Protein processing in endoplasmic reticulum 3
bra00190 Oxidative phosphorylation 3
bra00513 Various types of N-glycan biosynthesis 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8058156 8076903 8079405 103636640 100216671 103643076 4325141 9269121 4346201 123091204 123079210 123152133 123451771 123444440 123447826 100831659 100829244 104582867 819002 834667 100801679 100788145 100813426 101263189 101250385 101259271 103827742 103866758 103839619 100259405 100250312 7483585 7472516 7465612 11441312 25499761 107938957 107939683 121230866 125575018 106411046 106397029 102593695 102587503 102617721 102615388 107780684 107817540 107780928 5725522
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