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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058634   E3 ubiquitin-protein ligase Os03g0188200 
 zma-u.5   103653907   RING-H2 finger protein ATL72 
 zma-u.5   100281828   RING-H2 finger protein ATL2M 
 zma-u.5   100274803   putative RING zinc finger domain superfamily protein 
 osa-u.5   9271312   putative RING-H2 finger protein ATL71 
 osa-u.5   9270933   RING-H2 finger protein ATL80 
 osa-u.5   9266460   RING-H2 finger protein ATL2 
 gma-u.5   100790202   RING-H2 finger protein ATL5 
 gma-u.5   100780922   RING-H2 finger protein ATL7-like 
 gma-u.5   100786109   RING-H2 finger protein ATL38 
 sly-u.5   101252244   RING-H2 finger protein ATL38-like 
 sly-u.5   101263351   RING-H2 finger protein ATL64 
 sly-u.5   101268474   RING-H2 finger protein ATL39-like 
 vvi-u.5   100267800   RING-H2 finger protein ATL38 
 vvi-u.5   100267780   RING-H2 finger protein ATL8 
 ppo-u.5   7494898   RING-H2 finger protein ATL8 
 ppo-u.5   7494034   RING-H2 finger protein ATL39 
 ppo-u.5   7464902   RING-H2 finger protein ATL7 
 mtr-u.5   25485819   RING-H2 finger protein ATL8 
 mtr-u.5   25500957   RING-H2 finger protein ATL39 
 mtr-u.5   11432107   RING-H2 finger protein ATL5 

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Top 50 coexpressed genes to 8058634 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058634 (sbi-r.1 coexpression data)

CoexMap"8058634"


sbiLOC8058634 | Entrez gene ID : 8058634      
Species sbi zma osa gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae ath bna ghi
Paralog 1 3 3 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002453924.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_002453924.1)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for XP_002453924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058634

.
zma-u.5
for
103653907

.
zma-u.5
for
100281828

.
zma-u.5
for
100274803

.
osa-u.5
for
9271312

.
osa-u.5
for
9270933

.
osa-u.5
for
9266460

.
gma-u.5
for
100790202

.
gma-u.5
for
100780922

.
gma-u.5
for
100786109

.
sly-u.5
for
101252244

.
sly-u.5
for
101263351

.
sly-u.5
for
101268474

.
vvi-u.5
for
100267800

.
vvi-u.5
for
100267780

.
ppo-u.5
for
7494898

.
ppo-u.5
for
7494034

.
ppo-u.5
for
7464902

.
mtr-u.5
for
25485819

.
mtr-u.5
for
25500957

.
mtr-u.5
for
11432107

.


Ortholog ID: 1776
Species gma gma sly sly osa osa zma zma vvi vvi ppo ppo mtr mtr tae tae hvu ghi sbi sbi sot sot cit cit bdi bdi nta nta
Symbol LOC100810553 LOC100794979 LOC101252244 LOC101263351 LOC9271312 LOC9266460 LOC103653907 LOC100274803 LOC100267780 LOC100267800 LOC7494034 LOC7477186 LOC25500957 LOC11432107 LOC123190024 LOC123111186 LOC123427457 LOC107921191 LOC8058634 LOC8066959 LOC102594380 LOC102604126 LOC102609930 LOC127900959 LOC100832002 LOC100823078 LOC107790345 LOC107764016
Function* RING-H2 finger protein ATL39 RING-H2 finger protein ATL38 RING-H2 finger protein ATL38-like RING-H2 finger protein ATL64 putative RING-H2 finger protein ATL71 RING-H2 finger protein ATL2 RING-H2 finger protein ATL72 putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL8 RING-H2 finger protein ATL38 RING-H2 finger protein ATL39 RING-H2 finger protein ATL8 RING-H2 finger protein ATL39 RING-H2 finger protein ATL5 putative RING-H2 finger protein ATL69 RING-H2 finger protein ATL67 putative RING-H2 finger protein ATL69 RING-H2 finger protein ATL2 E3 ubiquitin-protein ligase Os03g0188200 RING-H2 finger protein ATL2 RING-H2 finger protein ATL64-like RING-H2 finger protein ATL38-like RING-H2 finger protein ATL38-like RING-H2 finger protein ATL74-like putative RING-H2 finger protein ATL69 putative RING-H2 finger protein ATL69 RING-H2 finger protein ATL38-like RING-H2 finger protein ATL2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00620 Pyruvate metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00071 Fatty acid degradation 2
sot00350 Tyrosine metabolism 2
sot00620 Pyruvate metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00561 Glycerolipid metabolism 2
bdi00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100810553 100794979 101252244 101263351 9271312 9266460 103653907 100274803 100267780 100267800 7494034 7477186 25500957 11432107 123190024 123111186 123427457 107921191 8058634 8066959 102594380 102604126 102609930 127900959 100832002 100823078 107790345 107764016
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