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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060473   pentatricopeptide repeat-containing protein At4g38150 
 zma-u.5   100272969   Tetratricopeptide repeat (TPR)-like superfamily protein 
 osa-u.5   4340848   pentatricopeptide repeat-containing protein At4g38150 
 ath-u.5   AT5G03560   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100789181   pentatricopeptide repeat-containing protein At4g38150 
 sly-u.5   101244998   pentatricopeptide repeat-containing protein 
 vvi-u.5   100256219   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   11412925   pentatricopeptide repeat-containing protein At4g38150 

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Top 50 coexpressed genes to 8060473 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060473 (sbi-r.1 coexpression data)

CoexMap"8060473"


sbiLOC8060473 | Entrez gene ID : 8060473      
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448436.1 [sequence] [blastp]
XP_021318764.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_002448436.1)
chlo 7,  mito 3  (predict for XP_021318764.1)
Subcellular
localization
TargetP
mito 9,  chlo 6  (predict for XP_002448436.1)
mito 9,  chlo 6  (predict for XP_021318764.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060473

.
zma-u.5
for
100272969

.
osa-u.5
for
4340848

.
ath-u.5
for
AT5G03560

.
gma-u.5
for
100789181

.
sly-u.5
for
101244998

.
vvi-u.5
for
100256219

.
mtr-u.5
for
11412925

.


Ortholog ID: 12464
Species ath gma sly osa zma vvi mtr tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT5G03560 LOC100789181 LOC101244998 LOC4340848 LOC100272969 LOC100256219 LOC11412925 LOC123180117 LOC123397249 LOC107892545 LOC107889364 LOC8060473 LOC102600073 LOC102615043 LOC100842815 LOC107784022 LOC107795709
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g38150 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC107784022 uncharacterized LOC107795709
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03018 RNA degradation 5
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03018 RNA degradation 5
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831789 100789181 101244998 4340848 100272969 100256219 11412925 123180117 123397249 107892545 107889364 8060473 102600073 102615043 100842815 107784022 107795709
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