Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060990   DNA repair protein XRCC2 homolog 
 zma-u.5   100383265   uncharacterized LOC100383265 
 ath-u.5   XRCC2   homolog of X-ray repair cross complementing 2 (XRCC2) 
 gma-u.5   100818578   DNA repair protein XRCC2 homolog 
 gma-u.5   100807727   DNA repair protein XRCC2 homolog 
 sly-u.5   101255234   DNA repair protein XRCC2 homolog 
 vvi-u.5   100262890   DNA repair protein XRCC2 homolog 

close


Top 50 coexpressed genes to 8060990 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8060990 (sbi-r.1 coexpression data)

CoexMap"8060990"


sbiLOC8060990 | Entrez gene ID : 8060990      
Species sbi zma ath gma sly vvi ppo hvu mtr osa sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03440 [list] [network] Homologous recombination (62 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (84 genes)  IEA  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (4 genes)  IEA  
GO:0005657 [list] [network] replication fork  (55 genes)  IEA  
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002456705.1 [sequence] [blastp]
XP_021310697.1 [sequence] [blastp]
XP_021310698.1 [sequence] [blastp]
XP_021310699.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 3,  cyto 3,  nucl_plas 2  (predict for XP_002456705.1)
chlo 3,  cyto 3,  nucl 2,  nucl_plas 1,  cyto_pero 1  (predict for XP_021310697.1)
chlo 4,  cyto 3,  nucl 2,  pero 1,  cysk 1  (predict for XP_021310698.1)
chlo 5,  nucl_plas 1,  nucl 1,  cyto 1,  extr 1,  pero 1,  cyto_E.R. 1  (predict for XP_021310699.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002456705.1)
chlo 3  (predict for XP_021310697.1)
chlo 3  (predict for XP_021310698.1)
chlo 3  (predict for XP_021310699.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060990

.
zma-u.5
for
100383265

.
ath-u.5
for
XRCC2

.
gma-u.5
for
100818578

.
gma-u.5
for
100807727

.
sly-u.5
for
101255234

.
vvi-u.5
for
100262890

.


Ortholog ID: 9194
Species ath gma gma sly zma bra vvi ghi ghi bna bna cre sbi sot bdi nta nta
Symbol XRCC2 LOC100807727 LOC100818578 LOC101255234 LOC100383265 LOC103837530 LOC100262890 LOC107918646 LOC107893562 LOC106357643 LOC106403050 CHLRE_06g278174v5 LOC8060990 LOC102581295 LOC100842954 LOC107820410 LOC107831709
Function* homolog of X-ray repair cross complementing 2 (XRCC2) DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog uncharacterized LOC100383265 DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog uncharacterized protein DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog DNA repair protein XRCC2 homolog
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03440 Homologous recombination 5
vvi03410 Base excision repair 3
vvi03420 Nucleotide excision repair 3
vvi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03430 Mismatch repair 3
cre03030 DNA replication 2
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 3
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836573 100807727 100818578 101255234 100383265 103837530 100262890 107918646 107893562 106357643 106403050 5723645 8060990 102581295 100842954 107820410 107831709
The preparation time of this page was 0.1 [sec].