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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062684   CDK5RAP1-like protein 
 zma-u.5   103648137   CDK5RAP1-like protein 
 osa-u.5   4350829   CDK5RAP1-like protein 
 tae-r.2   123097268   CDK5RAP1-like protein 
 tae-r.2   123092107   CDK5RAP1-like protein 
 tae-r.2   123085984   CDK5RAP1-like protein 
 hvu-r.1   123448328   CDK5RAP1-like protein 
 bdi-r.1   100821965   CDK5RAP1-like protein 
 ath-u.5   AT4G36390   Methylthiotransferase 
 gma-u.5   100812447   CDK5RAP1-like protein 
 gma-u.5   100799544   CDK5RAP1-like protein 
 sly-u.5   101245311   CDK5RAP1-like protein 
 bra-r.6   103868546   CDK5RAP1-like protein 
 vvi-u.5   100266017   CDK5RAP1-like protein 
 ppo-u.5   7480150   CDK5RAP1-like protein 
 mtr-u.5   11408076   CDK5RAP1-like protein 
 ghi-r.1   107913041   CDK5RAP1-like protein 
 ghi-r.1   107914282   CDK5RAP1-like protein 
 ghi-r.1   107897615   CDK5RAP1-like protein 
 bna-r.1   106443763   CDK5RAP1-like protein 
 bna-r.1   106448735   CDK5RAP1-like protein 
 sot-r.1   102597794   CDK5RAP1-like protein 
 cit-r.1   102622909   CDK5RAP1-like protein 
 nta-r.1   107818346   CDK5RAP1-like protein 
 nta-r.1   107771927   CDK5RAP1-like protein 
 cre-r.1   CHLRE_11g467633v5   uncharacterized protein 

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Top 50 coexpressed genes to 8062684 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062684 (sbi-r.1 coexpression data)

CoexMap"8062684"


sbiLOC8062684 | Entrez gene ID : 8062684    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 1 1 1 1 3 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045736 [list] [network] negative regulation of cyclin-dependent protein serine/threonine kinase activity  (6 genes)  IEA  
GO:0006400 [list] [network] tRNA modification  (79 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0035597 [list] [network] tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity  (1 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (26 genes)  IEA  
Protein XP_002451035.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002451035.1)
Subcellular
localization
TargetP
chlo 8,  mito 7  (predict for XP_002451035.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062684
zma-u.5
for
103648137
osa-u.5
for
4350829
tae-r.2
for
123097268
tae-r.2
for
123092107
tae-r.2
for
123085984
hvu-r.1
for
123448328
bdi-r.1
for
100821965
ath-u.5
for
AT4G36390
gma-u.5
for
100812447
gma-u.5
for
100799544
sly-u.5
for
101245311
bra-r.6
for
103868546
vvi-u.5
for
100266017
ppo-u.5
for
7480150
mtr-u.5
for
11408076
ghi-r.1
for
107913041
ghi-r.1
for
107914282
ghi-r.1
for
107897615
bna-r.1
for
106443763
bna-r.1
for
106448735
sot-r.1
for
102597794
cit-r.1
for
102622909
nta-r.1
for
107818346
nta-r.1
for
107771927
cre-r.1
for
CHLRE_11g467633v5


Ortholog ID: 9065
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC8062684 LOC103648137 LOC4350829 LOC123097268 LOC123092107 LOC123085984 LOC123448328 LOC100821965 AT4G36390 LOC100812447 LOC100799544 LOC101245311 LOC103868546 LOC100266017 LOC7480150 LOC11408076 LOC107913041 LOC107914282 LOC107897615 LOC106443763 LOC106448735 LOC102597794 LOC102622909 LOC107818346 LOC107771927 CHLRE_11g467633v5
Function* CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein Methylthiotransferase CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein CDK5RAP1-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00190 Oxidative phosphorylation 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra03060 Protein export 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00900 Terpenoid backbone biosynthesis 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna01240 Biosynthesis of cofactors 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna04016 MAPK signaling pathway - plant 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00030 Pentose phosphate pathway 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00030 Pentose phosphate pathway 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8062684 103648137 4350829 123097268 123092107 123085984 123448328 100821965 829791 100812447 100799544 101245311 103868546 100266017 7480150 11408076 107913041 107914282 107897615 106443763 106448735 102597794 102622909 107818346 107771927 5724364
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