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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063385   uncharacterized LOC8063385 
 zma-u.5   100381589   Ran BP2/NZF zinc finger-like superfamily protein 
 osa-u.5   4333891   zinc finger protein VAR3, chloroplastic 
 ath-u.5   AT1G70650   Ran BP2/NZF zinc finger-like superfamily protein 
 gma-u.5   102669698   uncharacterized LOC102669698 
 gma-u.5   100812864   zinc finger protein VAR3, chloroplastic 
 sly-u.5   101256901   zinc finger protein VAR3, chloroplastic 
 vvi-u.5   100264495   uncharacterized LOC100264495 
 ppo-u.5   7462679   zinc finger protein VAR3, chloroplastic 
 mtr-u.5   25482534   zinc finger protein VAR3, chloroplastic 

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Top 50 coexpressed genes to 8063385 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8063385 (sbi-r.1 coexpression data)

CoexMap"8063385"


sbiLOC8063385 | Entrez gene ID : 8063385    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002466578.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  mito 1,  cyto_mito 1  (predict for XP_002466578.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_002466578.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063385

.
zma-u.5
for
100381589

.
osa-u.5
for
4333891

.
ath-u.5
for
AT1G70650

.
gma-u.5
for
102669698

.
gma-u.5
for
100812864

.
sly-u.5
for
101256901

.
vvi-u.5
for
100264495

.
ppo-u.5
for
7462679

.
mtr-u.5
for
25482534

.


Ortholog ID: 11800
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi sbi sot bdi nta nta
Symbol AT1G70650 LOC100812864 LOC102669698 LOC101256901 LOC4333891 LOC100381589 LOC103831601 LOC100264495 LOC7462679 LOC25482534 LOC123089929 LOC123096595 LOC123447455 LOC107885927 LOC107921315 LOC8063385 LOC102585495 LOC100842812 LOC107787083 LOC107782298
Function* Ran BP2/NZF zinc finger-like superfamily protein zinc finger protein VAR3, chloroplastic uncharacterized LOC102669698 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic Ran BP2/NZF zinc finger-like superfamily protein zinc finger protein VAR3, chloroplastic uncharacterized LOC100264495 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC123089929 uncharacterized LOC123096595 uncharacterized LOC123447455 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC8063385 zinc finger protein VAR3, chloroplastic-like uncharacterized LOC100842812 uncharacterized LOC107787083 uncharacterized LOC107782298
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04626 Plant-pathogen interaction 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae04626 Plant-pathogen interaction 3
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843402 100812864 102669698 101256901 4333891 100381589 103831601 100264495 7462679 25482534 123089929 123096595 123447455 107885927 107921315 8063385 102585495 100842812 107787083 107782298
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