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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065609   pre-mRNA-splicing factor syf2 
 zma-u.5   100272811   uncharacterized LOC100272811 
 zma-u.5   100274600   uncharacterized LOC100274600 
 osa-u.5   4342038   uncharacterized LOC4342038 
 ath-u.5   AT2G16860   GCIP-interacting family protein 
 gma-u.5   100811651   pre-mRNA-splicing factor syf2 
 gma-u.5   100787714   pre-mRNA-splicing factor syf2-like 
 sly-u.5   101245103   pre-mRNA-splicing factor syf2 
 vvi-u.5   100252114   uncharacterized LOC100252114 
 ppo-u.5   7470411   uncharacterized LOC7470411 
 mtr-u.5   25485617   pre-mRNA-splicing factor syf2 

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Top 50 coexpressed genes to 8065609 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065609 (sbi-r.1 coexpression data)

CoexMap"8065609"


sbiLOC8065609 | Entrez gene ID : 8065609      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO CC
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (13 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (61 genes)  IEA  
GO MF
Protein XP_002437578.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 3,  mito_plas 3  (predict for XP_002437578.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_002437578.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065609

.
zma-u.5
for
100272811

.
zma-u.5
for
100274600

.
osa-u.5
for
4342038

.
ath-u.5
for
AT2G16860

.
gma-u.5
for
100811651

.
gma-u.5
for
100787714

.
sly-u.5
for
101245103

.
vvi-u.5
for
100252114

.
ppo-u.5
for
7470411

.
mtr-u.5
for
25485617

.


Ortholog ID: 7151
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol AT2G16860 LOC100787714 LOC100811651 LOC101245103 LOC4342038 LOC100274600 LOC100272811 LOC103846014 LOC100252114 LOC7470411 LOC25485617 LOC123159630 LOC123148507 LOC123409780 LOC107920904 LOC107949108 LOC106394398 LOC106428727 LOC8065609 LOC102589746 LOC102598501 LOC102624154 LOC100840457 LOC100831412 LOC107815181 LOC107786751
Function* GCIP-interacting family protein pre-mRNA-splicing factor syf2-like pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 uncharacterized LOC4342038 uncharacterized LOC100274600 uncharacterized LOC100272811 pre-mRNA-splicing factor syf2 uncharacterized LOC100252114 uncharacterized LOC7470411 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2-like pre-mRNA-splicing factor syf2-like uncharacterized LOC102624154 pre-mRNA-splicing factor syf2 pre-mRNA-splicing factor syf2 uncharacterized LOC107815181 uncharacterized LOC107786751
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma04712 Circadian rhythm - plant 3
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03083 Polycomb repressive complex 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816187 100787714 100811651 101245103 4342038 100274600 100272811 103846014 100252114 7470411 25485617 123159630 123148507 123409780 107920904 107949108 106394398 106428727 8065609 102589746 102598501 102624154 100840457 100831412 107815181 107786751
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