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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065855   uncharacterized LOC8065855 
 zma-u.5   100194294   CRS1 / YhbY domain containing protein 
 osa-u.5   4349098   uncharacterized LOC4349098 
 ath-u.5   AT4G39040   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100779359   uncharacterized LOC100779359 
 sly-u.5   101264983   uncharacterized LOC101264983 
 vvi-u.5   100243481   uncharacterized LOC100243481 
 ppo-u.5   7456344   uncharacterized LOC7456344 
 mtr-u.5   11443147   uncharacterized LOC11443147 

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Top 50 coexpressed genes to 8065855 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065855 (sbi-r.1 coexpression data)

CoexMap"8065855"


sbiLOC8065855 | Entrez gene ID : 8065855      
Species sbi zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra tae nta bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002464382.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4,  cyto_mito 2  (predict for XP_002464382.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_002464382.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065855

.
zma-u.5
for
100194294

.
osa-u.5
for
4349098

.
ath-u.5
for
AT4G39040

.
gma-u.5
for
100779359

.
sly-u.5
for
101264983

.
vvi-u.5
for
100243481

.
ppo-u.5
for
7456344

.
mtr-u.5
for
11443147

.


Ortholog ID: 7922
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna cre cre sbi sot cit bdi nta nta
Symbol AT4G39040 LOC100779359 LOC101264983 LOC4349098 LOC100194294 LOC103828066 LOC103864268 LOC100243481 LOC7456344 LOC11443147 LOC123158832 LOC123048542 LOC123434226 LOC107944987 LOC107927995 LOC106349496 CHLRE_10g421200v5 CHLRE_14g625901v5 LOC8065855 LOC102582473 LOC102616136 LOC100826154 LOC107791554 LOC107759865
Function* RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized LOC100779359 uncharacterized LOC101264983 uncharacterized LOC4349098 CRS1 / YhbY domain containing protein bromo and FHA domain-containing protein DDB_G0267958 uncharacterized LOC103864268 uncharacterized LOC100243481 uncharacterized LOC7456344 uncharacterized LOC11443147 uncharacterized LOC123158832 uncharacterized LOC123048542 uncharacterized LOC123434226 uncharacterized LOC107944987 uncharacterized LOC107927995 uncharacterized LOC106349496 uncharacterized protein uncharacterized protein uncharacterized LOC8065855 uncharacterized LOC102582473 uncharacterized LOC102616136 uncharacterized LOC100826154 uncharacterized LOC107791554 uncharacterized LOC107759865
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830059 100779359 101264983 4349098 100194294 103828066 103864268 100243481 7456344 11443147 123158832 123048542 123434226 107944987 107927995 106349496 5728270 66056279 8065855 102582473 102616136 100826154 107791554 107759865
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