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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8067589   F-box/LRR-repeat protein 3 
 zma-u.5   103647160   F-box/LRR-repeat protein 3 
 osa-u.5   4351279   F-box/LRR-repeat protein 3 
 osa-u.5   9270453   F-box/LRR-repeat protein 3 
 ath-u.5   AT5G01720   RNI-like superfamily protein 
 gma-u.5   100812083   F-box/LRR-repeat protein 3 
 gma-u.5   100803617   F-box/LRR-repeat protein 3 
 gma-u.5   100791500   F-box/LRR-repeat protein 3 
 sly-u.5   101243752   F-box/LRR-repeat protein 3 
 vvi-u.5   100246775   F-box/LRR-repeat protein 3 
 vvi-u.5   100258428   F-box/LRR-repeat protein 3 
 ppo-u.5   7487347   F-box/LRR-repeat protein 3 
 ppo-u.5   7488750   F-box/LRR-repeat protein 3 
 mtr-u.5   25491418   F-box/LRR-repeat protein 3 

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Top 50 coexpressed genes to 8067589 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8067589 (sbi-r.1 coexpression data)

CoexMap"8067589"


sbiLOC8067589 | Entrez gene ID : 8067589      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 3 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (59 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (52 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448875.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 1,  cyto_mito 1,  chlo 1,  cysk 1  (predict for XP_002448875.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002448875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8067589

.
zma-u.5
for
103647160

.
osa-u.5
for
4351279

.
osa-u.5
for
9270453

.
ath-u.5
for
AT5G01720

.
gma-u.5
for
100812083

.
gma-u.5
for
100803617

.
gma-u.5
for
100791500

.
sly-u.5
for
101243752

.
vvi-u.5
for
100246775

.
vvi-u.5
for
100258428

.
ppo-u.5
for
7487347

.
ppo-u.5
for
7488750

.
mtr-u.5
for
25491418

.


Ortholog ID: 6352
Species ath gma gma sly osa osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit cit bdi nta nta
Symbol AT5G01720 LOC100803617 LOC100812083 LOC101243752 LOC4351279 LOC9270453 LOC103647160 LOC103855400 LOC100258428 LOC100246775 LOC7487347 LOC25491418 LOC123120481 LOC123111387 LOC123395327 LOC107927118 LOC107939668 LOC106427109 LOC106433790 LOC8067589 LOC8055508 LOC102589968 LOC102614204 LOC102609404 LOC100821244 LOC107787065 LOC107802971
Function* RNI-like superfamily protein F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04626 Plant-pathogen interaction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831688 100803617 100812083 101243752 4351279 9270453 103647160 103855400 100258428 100246775 7487347 25491418 123120481 123111387 123395327 107927118 107939668 106427109 106433790 8067589 8055508 102589968 102614204 102609404 100821244 107787065 107802971
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