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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8068985   30S ribosomal protein S1 homolog A 
 zma-u.5   103630659   uncharacterized LOC103630659 
 zma-u.5   100193118   uncharacterized LOC100193118 
 osa-u.5   4339443   protein PIGMENT DEFECTIVE 338, chloroplastic 
 osa-u.5   4324446   protein PIGMENT DEFECTIVE 338, chloroplastic 
 ath-u.5   PDE338   Nucleic acid-binding proteins superfamily 
 gma-u.5   100820145   protein PIGMENT DEFECTIVE 338, chloroplastic 
 gma-u.5   100811564   protein PIGMENT DEFECTIVE 338, chloroplastic 
 gma-u.5   100780996   protein PIGMENT DEFECTIVE 338, chloroplastic 
 sly-u.5   101263198   protein PIGMENT DEFECTIVE 338, chloroplastic 
 vvi-u.5   100240915   protein PIGMENT DEFECTIVE 338, chloroplastic 
 ppo-u.5   7492491   protein PIGMENT DEFECTIVE 338, chloroplastic 
 ppo-u.5   7467795   protein PIGMENT DEFECTIVE 338, chloroplastic 
 mtr-u.5   25485041   protein PIGMENT DEFECTIVE 338, chloroplastic 

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Top 50 coexpressed genes to 8068985 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068985 (sbi-r.1 coexpression data)

CoexMap"8068985"


sbiLOC8068985 | Entrez gene ID : 8068985    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 2 2 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0043489 [list] [network] RNA stabilization  (3 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021302567.1 [sequence] [blastp]
XP_021302568.1 [sequence] [blastp]
XP_021302569.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_021302567.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_021302568.1)
chlo 9  (predict for XP_021302569.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_021302567.1)
chlo 9  (predict for XP_021302568.1)
chlo 8  (predict for XP_021302569.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8068985

.
zma-u.5
for
103630659

.
zma-u.5
for
100193118

.
osa-u.5
for
4339443

.
osa-u.5
for
4324446

.
ath-u.5
for
PDE338

.
gma-u.5
for
100820145

.
gma-u.5
for
100811564

.
gma-u.5
for
100780996

.
sly-u.5
for
101263198

.
vvi-u.5
for
100240915

.
ppo-u.5
for
7492491

.
ppo-u.5
for
7467795

.
mtr-u.5
for
25485041

.


Ortholog ID: 6438
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol PDE338 LOC100811564 LOC100820145 LOC101263198 LOC4324446 LOC4339443 LOC103630659 LOC100193118 LOC103831680 LOC100240915 LOC7467795 LOC7492491 LOC25485041 LOC123070022 LOC123078481 LOC123448389 LOC123443792 LOC107910474 LOC121214605 LOC106381078 BNAA07G29500D LOC8082461 LOC8068985 LOC102580008 LOC102610673 LOC100833069 LOC100830014 LOC107763574 LOC107768976
Function* Nucleic acid-binding proteins superfamily protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic uncharacterized LOC103630659 uncharacterized LOC100193118 protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic-like protein PIGMENT DEFECTIVE 338, chloroplastic-like protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic protein PIGMENT DEFECTIVE 338, chloroplastic 30S ribosomal protein S1 30S ribosomal protein S1 homolog A 30S ribosomal protein S1 homolog A protein PIGMENT DEFECTIVE 338, chloroplastic uncharacterized LOC100833069 30S ribosomal protein S1 homolog A protein PIGMENT DEFECTIVE 338, chloroplastic-like protein PIGMENT DEFECTIVE 338, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843502 100811564 100820145 101263198 4324446 4339443 103630659 100193118 103831680 100240915 7467795 7492491 25485041 123070022 123078481 123448389 123443792 107910474 121214605 106381078 106354165 8082461 8068985 102580008 102610673 100833069 100830014 107763574 107768976
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