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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8071688   DNA-directed RNA polymerases I and III subunit RPAC2 
 sbi-r.1   8082797   uncharacterized LOC8082797 
 zma-u.5   100276725   uncharacterized LOC100276725 
 osa-u.5   4351715   uncharacterized LOC4351715 
 tae-r.2   123091400   DNA-directed RNA polymerases I and III subunit RPAC2 
 tae-r.2   123096368   DNA-directed RNA polymerases I and III subunit RPAC2 
 tae-r.2   123086555   DNA-directed RNA polymerases I and III subunit RPAC2 
 hvu-r.1   123447874   DNA-directed RNA polymerases I and III subunit RPAC2 
 bdi-r.1   100834353   DNA-directed RNA polymerases I and III subunit RPAC2 
 ath-u.5   RPC14   RNApolymerase 14 kDa subunit 
 gma-u.5   100807892   DNA-directed RNA polymerases I and III subunit RPAC2 
 gma-u.5   100500695   uncharacterized LOC100500695 
 sly-u.5   101255651   uncharacterized LOC101255651 
 sly-u.5   101262015   uncharacterized LOC101262015 
 bra-r.6   103868028   DNA-directed RNA polymerases I and III subunit RPAC2 
 vvi-u.5   100245061   uncharacterized LOC100245061 
 ppo-u.5   7485677   uncharacterized LOC7485677 
 mtr-u.5   112419899   DNA-directed RNA polymerases I and III subunit RPAC2 
 mtr-u.5   11437781   DNA-directed RNA polymerases I and III subunit RPAC2 
 ghi-r.1   107946924   DNA-directed RNA polymerases I and III subunit RPAC2 
 ghi-r.1   107950223   DNA-directed RNA polymerases I and III subunit RPAC2 
 ghi-r.1   107944352   DNA-directed RNA polymerases I and III subunit RPAC2 
 bna-r.1   106451529   DNA-directed RNA polymerases I and III subunit RPAC2 
 bna-r.1   106454933   DNA-directed RNA polymerases I and III subunit RPAC2-like 
 sot-r.1   102597561   DNA-directed RNA polymerases I and III subunit RPAC2-like 
 sot-r.1   102593288   DNA-directed RNA polymerases I and III subunit RPAC2-like 
 cit-r.1   102623776   uncharacterized LOC102623776 
 nta-r.1   107828969   uncharacterized LOC107828969 
 nta-r.1   107786875   uncharacterized LOC107786875 
 cre-r.1   CHLRE_12g484100v5   uncharacterized protein 

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Top 50 coexpressed genes to 8071688 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8071688 (sbi-r.1 coexpression data)

CoexMap"8071688"


sbiLOC8071688 | Entrez gene ID : 8071688      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 2 2 1 1 1 2 3 2 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03020 [list] [network] RNA polymerase (56 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (215 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (19 genes)  IEA  
GO:0005666 [list] [network] RNA polymerase III complex  (24 genes)  IEA  
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (34 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (479 genes)  IEA  
Protein XP_002449364.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto 2  (predict for XP_002449364.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002449364.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8071688
sbi-r.1
for
8082797
zma-u.5
for
100276725
osa-u.5
for
4351715
tae-r.2
for
123091400
tae-r.2
for
123096368
tae-r.2
for
123086555
hvu-r.1
for
123447874
bdi-r.1
for
100834353
ath-u.5
for
RPC14
gma-u.5
for
100807892
gma-u.5
for
100500695
sly-u.5
for
101255651
sly-u.5
for
101262015
bra-r.6
for
103868028
vvi-u.5
for
100245061
ppo-u.5
for
7485677
mtr-u.5
for
112419899
mtr-u.5
for
11437781
ghi-r.1
for
107946924
ghi-r.1
for
107950223
ghi-r.1
for
107944352
bna-r.1
for
106451529
bna-r.1
for
106454933
sot-r.1
for
102597561
sot-r.1
for
102593288
cit-r.1
for
102623776
nta-r.1
for
107828969
nta-r.1
for
107786875
cre-r.1
for
CHLRE_12g484100v5


Ortholog ID: 3433
Species sbi sbi zma osa tae tae tae hvu bdi ath gma gma sly sly bra vvi ppo mtr mtr ghi ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC8071688 LOC8082797 LOC100276725 LOC4351715 LOC123091400 LOC123096368 LOC123086555 LOC123447874 LOC100834353 RPC14 LOC100807892 LOC100500695 LOC101255651 LOC101262015 LOC103868028 LOC100245061 LOC7485677 LOC112419899 LOC11437781 LOC107956761 LOC121223691 LOC107911446 LOC106451529 LOC106454933 LOC102597561 LOC102593288 LOC102623776 LOC107828969 LOC107786875 CHLRE_12g484100v5
Function* DNA-directed RNA polymerases I and III subunit RPAC2 uncharacterized LOC8082797 uncharacterized LOC100276725 uncharacterized LOC4351715 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 RNApolymerase 14 kDa subunit DNA-directed RNA polymerases I and III subunit RPAC2 uncharacterized LOC100500695 uncharacterized LOC101255651 uncharacterized LOC101262015 DNA-directed RNA polymerases I and III subunit RPAC2 uncharacterized LOC100245061 uncharacterized LOC7485677 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 protein PAT1 homolog DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2 DNA-directed RNA polymerases I and III subunit RPAC2-like DNA-directed RNA polymerases I and III subunit RPAC2-like DNA-directed RNA polymerases I and III subunit RPAC2-like uncharacterized LOC102623776 uncharacterized LOC107828969 uncharacterized LOC107786875 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00073 Cutin, suberine and wax biosynthesis 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03020 RNA polymerase 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03008 Ribosome biogenesis in eukaryotes 3
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 4
sly03020 RNA polymerase 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03010 Ribosome 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03020 RNA polymerase 4
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
cre03020 RNA polymerase 4
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8071688 8082797 100276725 4351715 123091400 123096368 123086555 123447874 100834353 817503 100807892 100500695 101255651 101262015 103868028 100245061 7485677 112419899 11437781 107956761 121223691 107911446 106451529 106454933 102597561 102593288 102623776 107828969 107786875 5728728
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