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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074226   pentatricopeptide repeat-containing protein At1g73710 
 zma-u.5   100383141   uncharacterized LOC100383141 
 osa-u.5   107276837   pentatricopeptide repeat-containing protein At1g73710 
 ath-u.5   AT1G73710   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819387   pentatricopeptide repeat-containing protein At1g73710 
 sly-u.5   101261836   pentatricopeptide repeat-containing protein At1g73710 
 vvi-u.5   100244720   pentatricopeptide repeat-containing protein At1g73710 
 ppo-u.5   7497392   pentatricopeptide repeat-containing protein At1g73710 
 mtr-u.5   11428707   pentatricopeptide repeat-containing protein At1g73710 

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Top 50 coexpressed genes to 8074226 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074226 (sbi-r.1 coexpression data)

CoexMap"8074226"


sbiLOC8074226 | Entrez gene ID : 8074226    
Species sbi zma osa ath gma sly vvi ppo mtr nta bna tae bdi sot bra hvu cit cre ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021307886.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_021307886.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_021307886.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074226

.
zma-u.5
for
100383141

.
osa-u.5
for
107276837

.
ath-u.5
for
AT1G73710

.
gma-u.5
for
100819387

.
sly-u.5
for
101261836

.
vvi-u.5
for
100244720

.
ppo-u.5
for
7497392

.
mtr-u.5
for
11428707

.


Ortholog ID: 11521
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G73710 LOC100819387 LOC101261836 LOC107276837 LOC100383141 LOC103831847 LOC100244720 LOC7497392 LOC11428707 LOC123160145 LOC123170031 LOC123411527 LOC107898938 LOC107948986 LOC106354297 LOC106406360 LOC8074226 LOC102579894 LOC102611938 LOC104584742 LOC107812191 LOC107821441
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 uncharacterized LOC100383141 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710 pentatricopeptide repeat-containing protein At1g73710-like pentatricopeptide repeat-containing protein At1g73710-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma04148 Efferocytosis 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843706 100819387 101261836 107276837 100383141 103831847 100244720 7497392 11428707 123160145 123170031 123411527 107898938 107948986 106354297 106406360 8074226 102579894 102611938 104584742 107812191 107821441
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