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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075980   cullin-1 
 zma-u.5   103641392   cullin-1 
 zma-u.5   103635893   cullin-1-like 
 osa-u.5   4337820   cullin-1-like 
 ath-u.5   CUL1   cullin 1 
 gma-u.5   100779134   cullin-1 
 gma-u.5   100819650   cullin-1 
 gma-u.5   100793682   cullin-1 
 sly-u.5   101247231   cullin-1-like 
 sly-u.5   101248129   cullin-1-like 
 vvi-u.5   100261361   cullin-1 
 vvi-u.5   100233054   cullin-1 
 ppo-u.5   7479228   cullin-1 
 ppo-u.5   18094407   cullin-1 
 ppo-u.5   18101828   cullin-1 
 mtr-u.5   11413169   cullin-1 
 mtr-u.5   11422872   cullin-1 
 mtr-u.5   11425891   cullin-1 

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Top 50 coexpressed genes to 8075980 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075980 (sbi-r.1 coexpression data)

CoexMap"8075980"


sbiLOC8075980 | Entrez gene ID : 8075980    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04120 [list] [network] Ubiquitin mediated proteolysis (153 genes)
sbi04141 [list] [network] Protein processing in endoplasmic reticulum (204 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (93 genes)  IEA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (42 genes)  IEA  
Protein XP_002440598.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  plas 1  (predict for XP_002440598.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002440598.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075980

.
zma-u.5
for
103641392

.
zma-u.5
for
103635893

.
osa-u.5
for
4337820

.
ath-u.5
for
CUL1

.
gma-u.5
for
100779134

.
gma-u.5
for
100819650

.
gma-u.5
for
100793682

.
sly-u.5
for
101247231

.
sly-u.5
for
101248129

.
vvi-u.5
for
100261361

.
vvi-u.5
for
100233054

.
ppo-u.5
for
7479228

.
ppo-u.5
for
18094407

.
ppo-u.5
for
18101828

.
mtr-u.5
for
11413169

.
mtr-u.5
for
11422872

.
mtr-u.5
for
11425891

.


Ortholog ID: 711
Species gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi cre sbi sot sot cit bdi nta nta
Symbol LOC100778287 LOC100793682 LOC101249294 LOC101255534 LOC4325735 LOC103641392 LOC103635893 LOC103836734 LOC103858756 LOC100233054 LOC100261361 LOC18101828 LOC18094407 LOC25488176 LOC25494069 LOC123191196 LOC123425326 LOC123425335 LOC107888927 LOC107916074 CHLRE_17g734400v5 LOC8086363 LOC102579979 LOC102598676 LOC102612067 LOC100824990 LOC107783701 LOC107778339
Function* cullin-1 cullin-1 cullin-1 cullin-1 cullin-1-like cullin-1 cullin-1-like cullin-1 cullin-1 cullin-1 cullin-1 cullin-1 cullin-1 cullin-1 cullin-1 cullin-1 cullin-1-like cullin-1 cullin-1 cullin-1 uncharacterized protein cullin-1 cullin-1-like cullin-1-like cullin-1 cullin-1 cullin-1-like cullin-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04141 Protein processing in endoplasmic reticulum 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma03050 Proteasome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 3
zma03060 Protein export 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
bra03083 Polycomb repressive complex 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi03083 Polycomb repressive complex 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03083 Polycomb repressive complex 3
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr04142 Lysosome 2
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 8
cre04141 Protein processing in endoplasmic reticulum 4
cre03013 Nucleocytoplasmic transport 3
cre04120 Ubiquitin mediated proteolysis 3
cre03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 6
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100778287 100793682 101249294 101255534 4325735 103641392 103635893 103836734 103858756 100233054 100261361 18101828 18094407 25488176 25494069 123191196 123425326 123425335 107888927 107916074 5718619 8086363 102579979 102598676 102612067 100824990 107783701 107778339
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