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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077389   pentatricopeptide repeat-containing protein At3g13880 
 zma-u.5   103654647   pentatricopeptide repeat-containing protein At3g13880 
 zma-u.5   101202727   uncharacterized LOC101202727 
 osa-u.5   107280234   pentatricopeptide repeat-containing protein At3g13880-like 
 ath-u.5   AT3G13880   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100244885   pentatricopeptide repeat-containing protein At3g13880 
 mtr-u.5   25495661   pentatricopeptide repeat-containing protein At3g13880 

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Top 50 coexpressed genes to 8077389 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077389 (sbi-r.1 coexpression data)

CoexMap"8077389"


sbiLOC8077389 | Entrez gene ID : 8077389      
Species sbi zma osa ath vvi mtr sly bra nta cre hvu cit bdi ppo sot tae bna ghi gma
Paralog 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002456967.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  mito 1,  vacu 1  (predict for XP_002456967.1)
Subcellular
localization
TargetP
other 5  (predict for XP_002456967.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077389

.
zma-u.5
for
103654647

.
zma-u.5
for
101202727

.
osa-u.5
for
107280234

.
ath-u.5
for
AT3G13880

.
vvi-u.5
for
100244885

.
mtr-u.5
for
25495661

.


Ortholog ID: 10767
Species ath osa zma zma bra vvi mtr hvu ghi ghi sbi sbi bdi bdi
Symbol AT3G13880 LOC107280234 LOC101202727 LOC103654647 LOC103842513 LOC100244885 LOC25495661 LOC123445572 LOC107895070 LOC107920766 LOC8057856 LOC8077389 LOC100840864 LOC100846798
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g13880-like uncharacterized LOC101202727 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880-like pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880 pentatricopeptide repeat-containing protein At3g13880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 11
ghi00360 Phenylalanine metabolism 9
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820601 107280234 101202727 103654647 103842513 100244885 25495661 123445572 107895070 107920766 8057856 8077389 100840864 100846798
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