ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8077814	oligoribonuclease
zma-u.5	100192839	uncharacterized LOC100192839
osa-u.5	4329319	oligoribonuclease
osa-u.5	9270337	oligoribonuclease
ath-u.5	AT2G26970	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
gma-u.5	100795445	oligoribonuclease
gma-u.5	100527858	Orn domain-containing protein
sly-u.5	101264943	oligoribonuclease
vvi-u.5	100251263	oligoribonuclease
ppo-u.5	18094943	oligoribonuclease
mtr-u.5	25494927	oligoribonuclease

functional annotation

KEGG

sbi03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(539 genes)

IEA

GO MF

GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity	(39 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3505 genes)	IEA

Protein

XP_002453786.1 [sequence] [blastp]
XP_021315716.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 2, cyto 1, vacu 1, nucl 1, plas 1, nucl_plas 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_002453786.1)
chlo 4, extr 2, cyto 1, vacu 1, nucl 1, plas 1, nucl_plas 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_021315716.1)

Subcellular
localization
TargetP

other 5	(predict for XP_002453786.1)
other 5	(predict for XP_021315716.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8077814 .	zma-u.5 for 100192839 .	osa-u.5 for 4329319 .	osa-u.5 for 9270337 .	ath-u.5 for AT2G26970 .	gma-u.5 for 100795445 .	gma-u.5 for 100527858 .	sly-u.5 for 101264943 .	vvi-u.5 for 100251263 .	ppo-u.5 for 18094943 .	mtr-u.5 for 25494927 .

Ortholog ID: 5067

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

Polynucleotidyl transferase, ribonuclease H-like superfamily protein

oligoribonuclease

Orn domain-containing protein

oligoribonuclease

uncharacterized LOC100192839

oligoribonuclease

oligoribonuclease-like

oligoribonuclease

oligoribonuclease-like

oligoribonuclease

uncharacterized protein

oligoribonuclease

oligoribonuclease-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2
gma03008	Ribosome biogenesis in eukaryotes	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2
gma03008	Ribosome biogenesis in eukaryotes	2
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi03050	Proteasome	4
ghi00310	Lysine degradation	2
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	9
bna03013	Nucleocytoplasmic transport	4
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	6
bna04120	Ubiquitin mediated proteolysis	2
bna03008	Ribosome biogenesis in eukaryotes	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03008	Ribosome biogenesis in eukaryotes	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	5
bdi00240	Pyrimidine metabolism	2
bdi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta03010	Ribosome	2
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

817238

100795445

100527858

101264943

9270337

4329319

100192839

103836710

100251263

18094943

25494927

123146242

123426427

123402941

107898394

107930928

106426700

106392266

5728189

8077814

102587584

102621451

100832260

100828865

107777565

107783602

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8077814 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8077814 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	ath	gma	sly	vvi	ppo	mtr	bra	nta	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	1	1	2	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8077814 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8077814 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**