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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079686   probable polygalacturonase 
 sbi-r.1   8054405   probable polygalacturonase 
 zma-u.5   100501436   uncharacterized LOC100501436 
 zma-u.5   100285112   polygalacturonase 
 osa-u.5   4334689   probable polygalacturonase 
 osa-u.5   4342825   probable polygalacturonase 
 tae-r.2   123123638   probable polygalacturonase 
 tae-r.2   123114145   probable polygalacturonase 
 tae-r.2   123087780   probable polygalacturonase 
 hvu-r.1   123394917   probable polygalacturonase 
 bdi-r.1   100825798   probable polygalacturonase 
 bdi-r.1   100843088   probable polygalacturonase 
 ath-u.5   AT3G62110   Pectin lyase-like superfamily protein 
 gma-u.5   100817309   probable polygalacturonase-like 
 gma-u.5   100786985   probable polygalacturonase 
 gma-u.5   100782602   probable polygalacturonase 
 bra-r.6   103830340   probable polygalacturonase 
 bra-r.6   103842039   probable polygalacturonase 
 vvi-u.5   100260519   probable polygalacturonase 
 ppo-u.5   7481446   probable polygalacturonase 
 ppo-u.5   7455388   probable polygalacturonase 
 mtr-u.5   11408219   probable polygalacturonase 
 mtr-u.5   11435313   probable polygalacturonase 
 ghi-r.1   107945985   probable polygalacturonase 
 ghi-r.1   107910549   probable polygalacturonase 
 ghi-r.1   107897159   probable polygalacturonase 
 bna-r.1   106452004   probable polygalacturonase 
 bna-r.1   106368509   probable polygalacturonase 
 bna-r.1   106353305   probable polygalacturonase 
 cit-r.1   102630512   probable polygalacturonase 

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Top 50 coexpressed genes to 8079686 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079686 (sbi-r.1 coexpression data)

CoexMap"8079686"


sbiLOC8079686 | Entrez gene ID : 8079686      
Species sbi zma osa tae hvu bdi ath gma bra vvi ppo mtr ghi bna cit sot cre sly nta
Paralog 2 2 2 3 1 2 1 3 2 1 2 2 3 3 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (729 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (40 genes)  IEA  
Protein XP_002463589.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  chlo 2,  extr 2,  E.R. 2  (predict for XP_002463589.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_002463589.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079686
sbi-r.1
for
8054405
zma-u.5
for
100501436
zma-u.5
for
100285112
osa-u.5
for
4334689
osa-u.5
for
4342825
tae-r.2
for
123123638
tae-r.2
for
123114145
tae-r.2
for
123087780
hvu-r.1
for
123394917
bdi-r.1
for
100825798
bdi-r.1
for
100843088
ath-u.5
for
AT3G62110
gma-u.5
for
100817309
gma-u.5
for
100786985
gma-u.5
for
100782602
bra-r.6
for
103830340
bra-r.6
for
103842039
vvi-u.5
for
100260519
ppo-u.5
for
7481446
ppo-u.5
for
7455388
mtr-u.5
for
11408219
mtr-u.5
for
11435313
ghi-r.1
for
107945985
ghi-r.1
for
107910549
ghi-r.1
for
107897159
bna-r.1
for
106452004
bna-r.1
for
106368509
bna-r.1
for
106353305
cit-r.1
for
102630512


Ortholog ID: 6594
Species sbi sbi zma zma osa osa tae tae tae hvu bdi bdi ath gma gma gma bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit
Symbol LOC8079686 LOC8054405 LOC100501436 LOC100285112 LOC4334689 LOC4342825 LOC123123638 LOC123114145 LOC123087780 LOC123394917 LOC100825798 LOC100843088 AT3G62110 LOC100817309 LOC100786985 LOC100782602 LOC103830340 LOC103842039 LOC100260519 LOC7481446 LOC7455388 LOC11408219 LOC11435313 LOC107945985 LOC107910549 LOC107897159 LOC106452004 LOC106353305 LOC111211377 LOC102630512
Function* probable polygalacturonase probable polygalacturonase uncharacterized LOC100501436 polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase Pectin lyase-like superfamily protein probable polygalacturonase-like probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00541 Biosynthesis of various nucleotide sugars 3
tae01240 Biosynthesis of cofactors 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04145 Phagosome 4
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03450 Non-homologous end-joining 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 4
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 2
gma00561 Glycerolipid metabolism 2
gma00600 Sphingolipid metabolism 2
gma00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra04517 IgSF CAM signaling 4
bra04814 Motor proteins 4
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8079686 8054405 100501436 100285112 4334689 4342825 123123638 123114145 123087780 123394917 100825798 100843088 825384 100817309 100786985 100782602 103830340 103842039 100260519 7481446 7455388 11408219 11435313 107945985 107910549 107897159 106452004 106353305 111211377 102630512
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