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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8080169   prolycopene isomerase 1, chloroplastic 
 zma-u.5   100281491   carotenoid isomerase 1 
 osa-u.5   4334739   prolycopene isomerase, chloroplastic 
 ath-u.5   AT1G57770   FAD/NAD(P)-binding oxidoreductase family protein 
 gma-u.5   100810986   prolycopene isomerase, chloroplastic 
 sly-u.5   CRTISO-L1   carotenoid isomerase 
 vvi-u.5   100262553   prolycopene isomerase, chloroplastic 
 ppo-u.5   18111148   prolycopene isomerase, chloroplastic 
 mtr-u.5   25494380   prolycopene isomerase, chloroplastic 

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Top 50 coexpressed genes to 8080169 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8080169 (sbi-r.1 coexpression data)

CoexMap"8080169"


sbiLOC8080169 | Entrez gene ID : 8080169      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016116 [list] [network] carotenoid metabolic process  (17 genes)  IEA  
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1434 genes)  IEA  
Protein XP_002463545.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002463545.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_002463545.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8080169

.
zma-u.5
for
100281491

.
osa-u.5
for
4334739

.
ath-u.5
for
AT1G57770

.
gma-u.5
for
100810986

.
sly-u.5
for
CRTISO-L1

.
vvi-u.5
for
100262553

.
ppo-u.5
for
18111148

.
mtr-u.5
for
25494380

.


Ortholog ID: 9267
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol AT1G57770 LOC100810986 CRTISO-L1 LOC4334739 LOC100281491 LOC103838658 LOC100262553 LOC18111148 LOC25494380 LOC123114258 LOC123123744 LOC123395020 LOC107920901 LOC107925337 LOC106434256 LOC106396155 CHLRE_09g407200v5 CHLRE_16g674950v5 LOC8080169 LOC102596427 LOC102625319 LOC100838735 LOC107805441 LOC107787313
Function* FAD/NAD(P)-binding oxidoreductase family protein prolycopene isomerase, chloroplastic carotenoid isomerase prolycopene isomerase, chloroplastic carotenoid isomerase 1 prolycopene isomerase 1, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic-like prolycopene isomerase, chloroplastic prolycopene isomerase 1, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase 1, chloroplastic prolycopene isomerase, chloroplastic-like uncharacterized protein uncharacterized protein prolycopene isomerase 1, chloroplastic prolycopene isomerase 1, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic prolycopene isomerase, chloroplastic-like prolycopene isomerase 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00052 Galactose metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 6
ppo01200 Carbon metabolism 6
ppo00195 Photosynthesis 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae00051 Fructose and mannose metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 7
ghi00053 Ascorbate and aldarate metabolism 6
ghi01200 Carbon metabolism 5
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 7
ghi00053 Ascorbate and aldarate metabolism 6
ghi01200 Carbon metabolism 5
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842152 100810986 101247017 4334739 100281491 103838658 100262553 18111148 25494380 123114258 123123744 123395020 107920901 107925337 106434256 106396155 5723233 5721453 8080169 102596427 102625319 100838735 107805441 107787313
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